Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0248
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Entry
RGRSB_0248 CDS
T05747
Name
(GenBank) binding protein dependent transport systems inner membrane component
KO
K02033
peptide/nickel transport system permease protein
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGRSB_0248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cer02000
]
RGRSB_0248
Transporters [BR:
cer02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RGRSB_0248
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Trep_Strep
Motif
Other DBs
NCBI-ProteinID:
BBA78856
UniProt:
A0A2Z5T142
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All DBs
Position
complement(392571..393620)
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AA seq
349 aa
AA seq
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MNSFSFFQSDRLLIKLKKYLTSETNLYVIKRILQGLFTLLLASFLSFLIIQIAPGNYLDT
LKQNPNISAETLASLTERFGLDRPWYEQYSKWLFQVITHFDFGESFVFNRAVISLLNERI
VATLLLSIASIILTWLIALPLGILSAVKKNSLIDKILRVISYLGQGFPSFITALLLLILA
QNVSPILPVGDMISLNHRELSPIGKIFDIGWHMILPTIALSITSFAGLMRLTRGQMLDVM
RQDYIQTARAKGLSEDKVIYVHGLRNAINPLITLLGFEFASLLGGSFIAEFFFNWPGLGT
LILGAVQAQDLYLVMGSLTMGATMLIVGNLLADLLLKAVDPRIKLENLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttctcattctttcagtctgatcgacttttaataaaactaaaaaaatattta
accagtgagactaatctttatgttataaaacgaattttacaaggactttttactttactg
ctagcttcttttcttagttttcttattattcaaatcgcccctggaaattatcttgatacc
ctcaaacaaaatcctaatatttctgccgaaaccctggctagtttaaccgaacgttttggc
ttagatagaccttggtatgagcagtatagtaaatggttatttcaagttattactcatttt
gattttggagaaagttttgtctttaatcgtgcagttatttccttgttaaatgaacgaatt
gtagcaacattattattgagtatagcttcgattattttaacttggctaatcgccttacct
cttggtatattgagtgcagtcaaaaagaacagtttgattgataaaattctgcgagtgatt
agttatttaggacagggatttcccagttttattacggcattattattattaattttggct
cagaatgtttctcctattttacctgtgggggatatgataagtttaaatcatcgagaatta
tctcccattgggaagatatttgatattggatggcatatgatcttaccaactatcgcctta
agtattacgagttttgccgggttaatgcgcttgacgcgtgggcaaatgttggatgtaatg
cgacaagattatattcaaactgcacgagcaaaaggattatctgaagataaagttatttat
gttcatggattgcgcaatgccattaaccccttaattactttactgggattcgagtttgct
agtttgttagggggatcatttattgcagaatttttctttaattggccaggattaggtact
ttaattttaggggcagttcaagcacaagatctttacctagttatgggaagtctaaccatg
ggagcaactatgttgattgtggggaatttattagcagatttattactaaaagcagttgat
cctcgtatcaaattagaaaacttaaaataa
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