Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0376
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Entry
RGRSB_0376 CDS
T05747
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00010
Glycolysis / Gluconeogenesis
cer00020
Citrate cycle (TCA cycle)
cer00260
Glycine, serine and threonine metabolism
cer00280
Valine, leucine and isoleucine degradation
cer00310
Lysine degradation
cer00380
Tryptophan metabolism
cer00620
Pyruvate metabolism
cer00630
Glyoxylate and dicarboxylate metabolism
cer00640
Propanoate metabolism
cer00670
One carbon pool by folate
cer00785
Lipoic acid metabolism
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
cer01120
Microbial metabolism in diverse environments
cer01200
Carbon metabolism
cer01210
2-Oxocarboxylic acid metabolism
cer01240
Biosynthesis of cofactors
Module
cer_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cer_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RGRSB_0376 (lpdA)
00020 Citrate cycle (TCA cycle)
RGRSB_0376 (lpdA)
00620 Pyruvate metabolism
RGRSB_0376 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RGRSB_0376 (lpdA)
00640 Propanoate metabolism
RGRSB_0376 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RGRSB_0376 (lpdA)
00280 Valine, leucine and isoleucine degradation
RGRSB_0376 (lpdA)
00310 Lysine degradation
RGRSB_0376 (lpdA)
00380 Tryptophan metabolism
RGRSB_0376 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RGRSB_0376 (lpdA)
00670 One carbon pool by folate
RGRSB_0376 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cer04147
]
RGRSB_0376 (lpdA)
Enzymes [BR:
cer01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RGRSB_0376 (lpdA)
Exosome [BR:
cer04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RGRSB_0376 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_oxidored
FAD_binding_2
DAO
3HCDH_N
NAD_binding_8
Thi4
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
HI0933_like
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BBA78964
UniProt:
A0A2Z5T6L6
LinkDB
All DBs
Position
complement(614740..616170)
Genome browser
AA seq
476 aa
AA seq
DB search
MSDQFDYDLVIIGAGVGGHGAAIHAVNRGLKTVIIEAKEMGGTCVNRGCIPSKALLAASG
RVRELQNTHHLNSLGIQVDGVVFQREAIANHATNLVNKIRGDLTKSLKRLKVDTIKGWGK
IVDNQKISVLTDDEEKFITTKDIILCPGSVPFIPHGIEIDHKTVFTSDEAVKLKILPQWI
AIIGSGYIGLEFSDIYTALGCEVTIIEALDTLMPGFDPEISKIAERVLIKPRDIETYSGV
FATKVIPGSPVTIELTDAKTKEVVNFLEVDACLVATGRIPATQNLGLENIGIETQRGFIP
VNDRLEVLSDGKAVPHLWAVGDATGKMMLAHAASGQGVIAVENICGQDRTINYRSIPAAA
FTHPEISYVGLTEPAARELGEKEGFTIASIKTHFKSNSKALAEGETDGIAKVIYHQGTGE
ILGVHIIGIHASDLIQEAANAIAQHQSVQNLAFNIHTHPTLSEVIDEAFKRASSAI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcagtttgattatgatctagttattattggcgcgggagtcggaggtcatggt
gcagctattcatgccgttaaccgtggactcaaaaccgttattattgaagcaaaagaaatg
ggaggaacctgtgttaatcgagggtgtattccatctaaagctctcctcgctgcatcagga
agggtaagagaattacaaaatactcatcaccttaatagtttagggattcaagtcgatgga
gtggtttttcaacgagaggcaatcgcgaatcatgctactaatttagttaataaaattcgg
ggtgatcttaccaagagcttaaaacgtctcaaagttgacaccatcaaaggatggggaaaa
attgttgacaaccaaaaaattagtgtattgactgatgacgaggaaaaatttatcaccaca
aaagacattatcttgtgtcctgggtcagttcccttcatacctcatggtattgaaattgat
cataaaactgttttcactagtgatgaggcagttaaattaaaaattttgccccagtggata
gcaattattggtagtggatatattgggttagaattttcagatatctatacagcccttgga
tgtgaagtaaccataattgaagcattagacactctgatgccagggtttgatccagaaatt
tcaaaaattgctgaacgagtattaattaaaccccgtgatatcgagacatattctggtgta
tttgctaccaaagttatcccaggttctcctgttaccattgaattaactgatgcaaagaca
aaagaagttgtaaattttctagaagtggatgcttgtttagtagcaactggacgtattcct
gcaacgcaaaacttgggattagaaaacattggtattgaaactcaacgaggatttattccc
gttaatgatcgcttagaagtcttatcagacgggaaagctgtccctcatttgtgggctgta
ggagatgcaacaggcaaaatgatgttagctcatgctgcttcaggacaaggagtgatcgca
gtagaaaatatttgtggacaagatagaacgattaattatcgtagcattccggctgctgct
tttacccatcccgaaattagttacgttgggttaactgaaccggcagcgagagaattaggg
gaaaaagaagggtttacaatagcctcgattaaaactcattttaagagtaattctaaagcc
ttagcagaaggagaaaccgatggtattgctaaagtgatttatcatcagggtacaggggag
atattgggagtccacattattggtattcatgcctcagacttaattcaagaagcagctaat
gcgattgctcaacatcagtctgtacaaaacttggcgtttaatattcatactcatcctact
ttatcggaagttattgacgaagcatttaaacgagctagttcagcgatttaa
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