Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0426
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Entry
RGRSB_0426 CDS
T05747
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RGRSB_0426 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cer03400
]
RGRSB_0426 (recO)
DNA repair and recombination proteins [BR:
cer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RGRSB_0426 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RGRSB_0426 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BBA79008
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All DBs
Position
684802..685647
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AA seq
281 aa
AA seq
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MSRIYKTTGIVLTRTPFGEADRLVKILSPEFGLIRAVVPGARKYTSKLSGRSELFVVNDL
LIVKGRSLDRIIQADTLKFYPRLSGNLGKLAASQYLAELVLSIALDEQPQRELYELLNEH
LHRLEEISSGQSLHSYLAQGVFHILVIAGISPQVHTCCLTNETLSADFNNPHWRVGFSFK
EGGLIKLTIPESFLSTQQESSKITRTLINQQLNALELSLLQQLGHPYLPQPRKILPPEYL
NNFLSLAWVHIEYLLRNYAQYHLGKSFRSADLIDTLSPLEF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaatttataaaaccacagggattgtcttaacaagaacaccttttggggaggct
gatcgtttagtaaaaattctttcaccagaattcggtttaattcgggcagtggttccaggg
gcaagaaaatatacatcaaaactaagcggacgtagtgagttatttgtagttaatgattta
ttaatagttaaagggcgatcacttgatcgaatcattcaagccgacaccttaaaattttat
cccagattaagtggaaatttaggtaaattggctgctagtcagtatttagctgaattagtt
ttgtctatagccttagatgaacaacctcaacgagaactttacgaactcctcaacgaacat
ttacatcgcctcgaagaaatctcatctggtcaaagtttacatagttatttagcccaaggg
gtgtttcatatattggtaatcgcgggaattagtcctcaagttcacacttgttgtttaact
aatgaaacgttatcagccgactttaacaatcctcattggcgagtggggtttagttttaaa
gaaggaggtttgatcaaattaacaattcccgaatctttcttatcaactcaacaagaatcc
tctaaaattacccggactttaattaatcaacaactaaatgctttagaactaagtctttta
caacaattaggacatccttatctcccacaaccacgaaaaatcttacctccagagtatctc
aataattttctatctctagcttgggttcacattgaatatctgttacgtaattatgcccaa
tatcatttaggtaaatcttttcgatcagccgatctcatcgatactttatctccattggag
ttttaa
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