Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0492
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Entry
RGRSB_0492 CDS
T05747
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer03030
DNA replication
cer03430
Mismatch repair
cer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGRSB_0492 (dnaE2)
03430 Mismatch repair
RGRSB_0492 (dnaE2)
03440 Homologous recombination
RGRSB_0492 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cer03032
]
RGRSB_0492 (dnaE2)
03400 DNA repair and recombination proteins [BR:
cer03400
]
RGRSB_0492 (dnaE2)
Enzymes [BR:
cer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGRSB_0492 (dnaE2)
DNA replication proteins [BR:
cer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGRSB_0492 (dnaE2)
DNA repair and recombination proteins [BR:
cer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGRSB_0492 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
BBA79067
UniProt:
A0A2Z5T268
LinkDB
All DBs
Position
764034..766739
Genome browser
AA seq
901 aa
AA seq
DB search
MSFVGLHIHSEYSLLDGASQLNALVDRALELEMPAIALTDHGVMYGVIELMKVCRNKGIK
PIIGNEMYVINEDIEVNKRHRRYHQVVLAKNTQGYKNLVKLTTISHLKGIQGKGIFSRPC
INKKLLEQYHEGLIVTSACIGGEIPQKILAGDLKEAKQIAKWYQKLFKDDFYLEIQDHGS
QEDRIVNREIVKIADKLDIKIIATNDSHFISCYDVEAHDALLCIQTQKLITEDKRLRYSG
TEYLKSAEEMRLLFRDHLPDSVIEEAINNTLEVANKIEHYKNIFGEPRIPNYPVPPGHNP
DSYIEEITWQGLIERLKCRSREEIPENYKERLEYELKMLQRMGFSTYFLVVWDYIKYARD
HKIPVGPGRGSAAGSLVAYSLKITNIDPVHHGLLFERFLNPERKSMPDVDTDFCIERRDE
MIRYVTEKYGEANVAQIITFNRMTSKAVLKDVARVLNIPYADSDKMAKMIPVSRGKPTKL
KVMISDETPELKFKEAYDSQEVDIKDDKGNVIGQIPVRNWVEMAIRIEGTNKTFGVHAAG
VVISSEPLDEVVPLQKNNEGAVITQYFMEDLESLGLLKMDFLGLRNLTTIQKTADLIKQN
RNIDLDLDQLPLEERKALQIIAKGTAKKLPGDIEKTYKLLARGDLEGIFQLESSGMKQIV
KDLKPSGIEDISSILALYRPGPLDAGLIPKFIDRKHGKEAIQYEHPLLESILEETYAVLV
YQEQIMKMAQDLAGYSLGEADLLRRAMGKKKISEMKKHREIFIDGSTKNGVPRNVAENLY
EQMVKFAEYCLSYDTKILTVEYGAISIGKVVEESLDCTVYTVDKNGFVYTQPIQQWHSRG
KQEIFEYCLEDGSIIRATKDHKFMTTEGKMYPIHDIFEQGLELRKITPQFSDNKTSPNRK
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggtttacatattcacagtgagtatagtctacttgatggagcgtctcaa
ctcaatgctttagttgatcgtgctttggaattagaaatgccagcgattgctctaacggat
catggagtaatgtatggagtgatcgaactcatgaaagtttgtcgcaataaaggaattaaa
ccaattatcggcaatgaaatgtatgttattaatgaagatattgaagttaataaacgtcat
cgaagataccatcaagttgtcttagccaaaaatacccaaggctataaaaatttagtaaag
ttaacaactatatctcaccttaaaggtattcagggaaaggggattttttctcgtccttgt
atcaataaaaaattattagagcaatatcacgaagggttaattgttactagtgcttgtata
ggaggcgaaattccccaaaaaattttagcaggagatttgaaagaggctaaacaaattgct
aaatggtatcaaaagttatttaaagatgacttttacttagaaatccaagatcatggttca
caagaagatcgaattgttaatcgagaaattgtcaaaattgctgataaattagacattaaa
attattgcaactaatgattctcattttatctcttgctatgacgtagaagctcatgatgcg
ttactttgtattcaaacgcaaaagttaattacagaagataaacgacttagatatagtggg
actgaatatctcaaatctgcagaagaaatgaggttattattccgagatcatcttcctgat
agtgtgattgaagaggcaataaataatactttagaagttgctaataaaattgaacattac
aaaaatatttttggagaacctcgcattcctaattatcccgttcctccaggacataatccc
gatagttacattgaagaaataacttggcaagggttgatagaaagattaaaatgtcgttct
cgtgaagaaataccagagaactataaggaaagattagaatatgaattaaaaatgttgcaa
agaatgggattctcaacttattttttagtagtttgggattatattaaatatgcaagagat
cacaaaattcctgtaggacctggaagaggatcggcggcaggttctctggttgcttattct
ttgaaaataactaatatagatccagttcatcacggacttttgtttgaaagatttttaaat
cctgaacggaaatctatgcccgatgttgatacagatttttgtattgaaagacgagatgaa
atgattagatatgttaccgaaaaatatggagaagctaatgttgctcaaattattactttt
aaccgtatgacttctaaggctgttttaaaagatgtggctagagtattaaatattccttat
gcagactccgacaaaatggcgaaaatgattccagtttcacggggaaaacccactaaatta
aaagtaatgatttctgatgaaacaccagagctaaaatttaaagaagcttatgatagtcaa
gaagtagatattaaagatgataaaggaaatgtgattggtcaaatccctgtacgtaattgg
gtggagatggcaattcgcatagaaggaaccaataagacctttggagttcatgctgcaggt
gtagttatttcttctgaacctttagacgaagttgtcccccttcaaaagaataatgaagga
gcagttattactcagtattttatggaagatttagagtccctcgggttgttaaaaatggac
tttttggggttaagaaatttaacaactattcagaaaacagcagatttaattaagcaaaat
agaaatatagatttagatttagatcaactacctttagaagaaagaaaagctttacaaatt
attgctaaaggaactgctaaaaaacttccaggtgatatagagaaaacatataaactttta
gcaagaggagacttagaaggaatttttcagttagaatcatcaggaatgaagcagatagtt
aaagatctaaaaccatcaggaattgaagatatttcctctattttagctctttatcgtcct
ggacccttggatgctggacttattcctaaatttattgatcgtaaacatggaaaagaagcg
attcaatatgaacatcctttattagaatccattcttgaggaaacctatgctgtcttagtt
tatcaagaacaaattatgaagatggcgcaagatctagcgggttattctttaggagaagca
gacctgttacgtcgcgcaatgggaaaaaagaaaatctcagaaatgaaaaagcatcgagag
atttttattgatgggtcaactaaaaatggggttcctagaaatgttgcagaaaatttgtat
gaacaaatggttaagtttgcggaatattgcttgagttatgatacaaagatattgactgtc
gaatatggagcaatttccataggtaaagtggtagaggaaagtctcgactgtactgtttat
acagtagacaaaaatggctttgtttatactcaacctattcaacaatggcattcacgaggt
aaacaagaaatatttgaatattgtcttgaggacggttccatcattcgagcaacaaaagac
cataaatttatgaccaccgaaggtaaaatgtaccctattcatgacatcttcgaacaagga
ttagagttgaggaaaattaccccccagttcagtgataacaaaacctcgccaaatcgaaaa
ttataa
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