Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0503
Help
Entry
RGRSB_0503 CDS
T05747
Symbol
tly
Name
(GenBank) hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cer03009
]
RGRSB_0503 (tly)
Enzymes [BR:
cer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
RGRSB_0503 (tly)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
RGRSB_0503 (tly)
Ribosome biogenesis [BR:
cer03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGRSB_0503 (tly)
23S rRNA modification factors
RGRSB_0503 (tly)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Motif
Other DBs
NCBI-ProteinID:
BBA79078
UniProt:
A0A2Z5SWU5
LinkDB
All DBs
Position
complement(779429..780238)
Genome browser
AA seq
269 aa
AA seq
DB search
MSKQRLDILLVNKNLCSSRQEAQGFILAGEVKVHQQVIDKPGTRVDITADIQLQAKARYV
SRGGFKLEKAVNTFKIAISGRICLDGGISTGGFTDCLLQAGAKQIYGIDVGYGQVAWRLR
RDERVLLKERTNFRYLTPDDLYGDSPQADLGVMDVSFISLTKLLEPLWNLLVVPKEVILL
VKPQFEVGRSRVGKKGIVRNPKDHAQAIDQVLQAACSLGWYYHGLTESPITRPGGNVEYL
LWLRCDQYKKSPQLKTLENFTQFIPNGLG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaacaacgcctcgatattttattagttaataagaatttgtgttcttcccgtcaa
gaagcccagggatttattctagctggagaagttaaggtacatcagcaagttattgataaa
ccaggaaccagagtcgacattacagccgacattcaactacaagctaaagcccgttatgtt
tctcgtggaggttttaagctcgaaaaagctgtaaatacttttaagatagctatatcaggg
cgaatttgtctagatggcggtatttctacaggagggtttaccgattgtctattacaggct
ggggcaaaacagatttatggaatagatgtaggttatgggcaagtagcatggcgtctacgt
cgagacgagcgggttcttttgaaagaaagaactaatttccgctatttaacccccgatgat
ttatatggagatagtcctcaagctgacttaggggtaatggatgtttcgtttatctcttta
actaaattattagaacccctgtggaatttgttagtagttcccaaagaagtcattttgttg
gtcaaacctcagtttgaagtagggcgatcgcgggttggaaaaaaagggattgttcgtaat
cccaaagatcacgcccaagctattgaccaagttctacaagctgcttgttctctggggtgg
tactatcacgggctaactgaatctcctattacccgacctgggggaaacgtggaatattta
ttatggttgcgttgcgatcaatataaaaaatcacctcagcttaaaactcttgagaatttt
acccaattcattcctaatggactaggttaa
DBGET
integrated database retrieval system
