Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0506
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Entry
RGRSB_0506 CDS
T05747
Symbol
spoIID
Name
(GenBank) sporulation protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cer01011
]
RGRSB_0506 (spoIID)
Enzymes [BR:
cer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RGRSB_0506 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
cer01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RGRSB_0506 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
DEK_C
HARP
Motif
Other DBs
NCBI-ProteinID:
BBA79081
UniProt:
A0A2Z5SXG1
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All DBs
Position
complement(788861..790009)
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AA seq
382 aa
AA seq
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MSQNYDLGSRVWTFKLSQILLGRYGWLTGLIWMILSFPAQGATELRVAIEKSVGTLKVGS
STPALVHDGAGHKLGELTQLEAFVVKPHRSGVNLDRWNSNQIVIEPTKNGSIWIGDRWYR
GKVRLIRQGNGVTAVNLVDLEEYLYSVVGSEAYPTWPIEALKSQAVVARTYALYKSSKAQ
NRYYDLDTTTKTQVYRGLETEFVTTHEAVNGTAGQVLTHNGKVILAAFHSSSGGHTENVE
DVWSSPLPYLRGVVDYDQLAPVFQWRKSFNAGQMGQLIGGIGAVRSLIPQRTTPHGRIIT
LKVVGTRGSKNITDDNLRKALDLKSTLFTVSANNETFQIDGRGYGHGIGLSQWGSHYLAE
QGIPYDQIVSHYYQNAQLTTLN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaactatgatttaggttctagagtctggacgttcaaactctcacagattttg
ttgggacgctatggctggttaacaggattaatttggatgattttgagttttccagctcaa
ggggctactgaattaagagttgctattgaaaaaagtgttggtaccctcaaagtgggaagc
tctacccctgctctagtccacgatggggcaggccacaaattgggagaattgactcagtta
gaggctttcgtcgtaaagcctcatcgtagtggagtgaatcttgatcgatggaattccaat
caaattgtcattgaacctactaaaaacggctctatttggatcggtgatcgttggtatcgg
ggcaaggtacgactaattcgtcagggaaatggcgtaacggcagttaacttagtcgattta
gaggaatatctttacagtgtagtagggtcagaagcttatccaacctggcccatagaagct
cttaaatcccaagctgtagttgcccgcacctacgctctctacaaaagttctaaggcacaa
aatcgttactacgatcttgatacaaccactaaaacccaggtgtatagggggttagaaact
gaatttgtcacgactcatgaagcggttaatggaacagctggtcaggtcttaacccacaat
ggcaaggtcatcttggcagccttccattcttcgtctggcggtcataccgaaaatgttgaa
gatgtttggagttcccctctaccatatttgcgtggcgtggtggactacgatcaactcgcc
cctgttttccaatggcgtaagtcttttaatgctggtcaaatgggacaactcatcggtggt
ataggagcagtacgatcacttattccccaacgaacgacccctcacggacggattattact
ctgaaagtagtaggaactcgcggttctaaaaatattactgatgacaatttgcgaaaagct
ctcgatctgaagagcaccttatttactgtttctgccaataatgaaacgtttcaaattgat
ggtaggggttacggtcatggtattggtctgagtcaatggggcagtcattacctagcagaa
caaggtatcccctatgaccaaattgtcagccattattatcaaaatgctcagttaacaacc
ttaaattaa
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