Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0532
Help
Entry
RGRSB_0532 CDS
T05747
Symbol
dnaK
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGRSB_0532 (dnaK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cer03019
]
RGRSB_0532 (dnaK)
03110 Chaperones and folding catalysts [BR:
cer03110
]
RGRSB_0532 (dnaK)
03029 Mitochondrial biogenesis [BR:
cer03029
]
RGRSB_0532 (dnaK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cer04147
]
RGRSB_0532 (dnaK)
Messenger RNA biogenesis [BR:
cer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RGRSB_0532 (dnaK)
Chaperones and folding catalysts [BR:
cer03110
]
Heat shock proteins
HSP70 / DNAK
RGRSB_0532 (dnaK)
Mitochondrial biogenesis [BR:
cer03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
RGRSB_0532 (dnaK)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
RGRSB_0532 (dnaK)
Exosome [BR:
cer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RGRSB_0532 (dnaK)
Exosomal proteins of breast cancer cells
RGRSB_0532 (dnaK)
Exosomal proteins of colorectal cancer cells
RGRSB_0532 (dnaK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
ParM_N
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-ProteinID:
BBA79106
LinkDB
All DBs
Position
complement(836000..837913)
Genome browser
AA seq
637 aa
AA seq
DB search
MGKVVGIDLGTTNSCVAVMEGGKPTVIANTEGFRTTPSVVAYAKNGDRLVGQIAKRQAVM
NPENTFYSVKRFIGRKHSEVKIETTEVSYKVDKDSNGNVKLDCPSQGKQFAPEEISAQVL
RKLVDDASKYLGETVTEAVITVPAYFNDSQRQATKDAGKIAGIEVKRIINEPTAASLAYG
LDKKSNETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTHLGGDDFDKKIVDYLAAEFK
AKEGVDLRQDKQALQRLTEAAEKAKIELSGVTQAEINLPFITATQEGPKHLDTTLTRAKF
EDLCSDLIDRCGIPVKNSMKDAKVSNSDIDEVVLVGGSTRIPAVQELVKKVLGKDPNQGV
NPDEVVAVGAAIQGGVLAGEVKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEV
FSTAQDGQANVEISVLQGEREMSRDNKSLGTFRLDGIPPAPRGVPQIEVTFDINADGILN
VTAKDKGTGKEQSISITGASTLPDTEVDRMVQEAEANAAADKERREKIDRKNEADSLVYQ
ADKQLKELGDKIPAADKTKAEGLISQLRDAIDKEDEETIKTVMPDLQQLLYSIGTSVYQQ
AGGQTPPDGATPGGGTGSSGSSEGGDDVIDAEFSETK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggttgttggaattgacttaggaactaccaactcgtgcgtggcggttatggaa
ggaggaaaacctactgtcattgccaatactgaaggatttcgtaccaccccctcagtggta
gcttatgccaagaatggtgatcgcttagtgggacaaattgctaagcgtcaagcggtgatg
aaccctgaaaacacattttattctgttaaacgcttcattggacgtaaacacagcgaagtc
aaaattgaaactacggaagtctcctacaaagttgacaaagacagcaatggtaatgttaag
ctagactgcccatcgcaaggcaaacaatttgcccctgaagaaatttctgcccaagttctc
cgtaaattagtggacgatgcgagtaaatatttaggagaaacagttacagaagcagttatc
accgttcctgcatactttaacgactctcagcgtcaagcgaccaaagacgcggggaaaatt
gctggaattgaagttaaacgtatcatcaacgaacctactgcagcatctttggcttatggg
ttagataaaaagagtaacgaaactattttggtatttgatttagggggagggacgttcgac
gtttccatcttagaagtcggggatggtgtttttgaagtactagccacctctggagatacc
catttaggaggagatgatttcgacaaaaaaattgtggactacttagccgcagaattcaag
gcaaaagaaggggtagacttaagacaagataaacaagccctacaacgtctgacagaagct
gcagagaaagcgaaaattgaactatctggcgttacccaggctgaaattaaccttcctttt
attacagctactcaagaaggacctaaacatcttgatacaactttaacacgagctaaattt
gaagacctctgctctgacctaattgatcgttgtggaattcctgtaaaaaattccatgaaa
gatgccaaagtcagcaatagtgatattgacgaggtcgtcttagtgggtgggtccactcgc
attcctgctgtgcaagaattagttaaaaaagttttaggaaaagaccccaatcaaggagtt
aacccagatgaggtagttgctgtaggggcagcaattcaaggaggtgtcctagccggagaa
gttaaagatatcttgctccttgacgtaacgcctttatctcttggggtagagacccttggt
ggtgtcatgactaagattattccccgtaacactactatccctaccaaaaaatctgaggtc
ttttccactgcacaagacggacaggcaaatgtagaaattagcgttcttcaaggagaacgg
gaaatgtcgcgggataacaagagtttaggaacttttcgccttgatggtattcctcccgca
cctcgtggtgttcctcaaattgaagtcacctttgatataaatgcagacggtattcttaat
gtaactgcaaaagataaaggaacagggaaagaacagtctattagcattactggggcttct
accctacctgatacagaagttgatcgtatggtacaagaagctgaagcaaatgctgcagct
gataaggaacgtcgagagaaaattgaccgcaaaaatgaggctgactctttggtctatcaa
gccgataaacaactaaaagaattgggtgataaaatccctgcagctgataagactaaggct
gaaggattaattagtcaactcagagacgctatcgacaaggaagatgaagaaaccatcaag
actgtcatgccagatctacagcaacttctctatagcattggtactagtgtctatcaacaa
gctggtggacaaactcctcctgatggtgcaacacctgggggtgggacaggttctagtggt
tcttctgaaggtggcgatgacgtaattgatgctgaattttcagaaactaaataa
DBGET
integrated database retrieval system
