Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0654
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Entry
RGRSB_0654 CDS
T05747
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00520
Amino sugar and nucleotide sugar metabolism
cer01100
Metabolic pathways
cer01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RGRSB_0654 (rfbB)
Enzymes [BR:
cer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
RGRSB_0654 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
BBA79206
UniProt:
A0A2Z5T1X9
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All DBs
Position
1005417..1006343
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AA seq
308 aa
AA seq
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MRILVTGGAGFIGSHLIDRLMEQGHDVLCLDNFYTGHKRNIEKWFDNPYFELIRHDITEP
IRLEVDQVYHLACPASPIHYQFNPVKTIKTNVLGTLYMLGLAKRVKARFLLASTSEVYGD
PDVHPQPEEYRGSVNCTGLRACYDEGKRVAETLAFEYHREHKVDIRVARIFNTYGPRMLK
NDGRVVSNFIVQALDKKPLTVYGDGSQTRSFCYVSDLVEGLIGLMNNDYIGPINLGNPGE
YSVLELAKIIREMINPDMELVYKALPQDDPRKRQPDITKASTYLGWEPMISLKEGLELTI
RDFQQRVS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctagtaacaggcggtgctggttttatcggctcccatttaattgatcgctta
atggaacagggacacgatgtcttgtgcttagataacttctatacaggtcacaaacgcaat
attgagaagtggtttgataatccttattttgaactaatccgtcatgacattactgaacct
attcgtcttgaagtagatcaagtttatcatcttgcttgtccagcctctccgattcactat
caatttaatcctgttaaaacgattaaaaccaacgttctaggaaccttgtatatgttggga
ttagctaaacgggttaaggcaagattcttgttagcgtctacctcggaagtttatggagat
cctgatgtacatccccaacctgaagaatatagaggcagtgttaactgtacagggttgcga
gcttgttatgatgagggaaaacgggtcgctgaaaccctggcttttgaatatcatcgagaa
cataaagttgatattcgggttgcgcggattttcaacacttatgggccacgaatgttaaaa
aatgacggtcgtgttgttagtaattttatcgtccaagccctagacaaaaaacctctgaca
gtttatggagatggctctcaaaccaggagtttctgctatgtctccgacttagttgaaggt
ttaattggacttatgaataatgattatattggcccaatcaatttaggcaatcctggagag
tattctgttctagaacttgccaaaattatccgagaaatgattaatcctgatatggaatta
gtctataaagctttacctcaagacgatccccggaaacgccaacctgatattactaaggcc
agcacctacctaggttgggaaccaatgatttctttaaaagaaggtttagagttaactatc
agagatttccagcaacgagtttcttaa
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