Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0890
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Entry
RGRSB_0890 CDS
T05747
Name
(GenBank) putative terpenoid synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00100
Steroid biosynthesis
cer00909
Sesquiterpenoid and triterpenoid biosynthesis
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
RGRSB_0890
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
RGRSB_0890
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cer01006
]
RGRSB_0890
Enzymes [BR:
cer01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
RGRSB_0890
Prenyltransferases [BR:
cer01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RGRSB_0890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BBA79414
LinkDB
All DBs
Position
complement(1380774..1381586)
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AA seq
270 aa
AA seq
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MTLRNNALKILKETSRTFYIPISRLPDGLQEAVSSAYLCMRAIDEVEDHPQLDNFTKAKL
LRRMSLNLQSGTENTSIENFSVGLMHYNAILPDVTLRVGEWALLAPNSIAPRVWDATAAM
ADRMAYWAENNWTINTEANLDQYTFSVAGAVGLLLSDLWAWYDGTQTNRTYAIGFGRGLQ
AVNIVRNHREDLKRGVNFLPQGWLEQDVHQYARRNLTLADYYTKSLPPGPALNFCKIPLA
LAYGTLEVMALGKKKLSRSDVIALVQQVTG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgactttacgaaataatgccctaaaaattctcaaggaaacgagtagaacattttatatt
cccattagccgtcttccagatgggttacaggaggctgtctcctctgcttatttatgtatg
cgggctattgatgaagtagaagatcatcctcaacttgataatttcaccaaagctaaactt
ttacgccgtatgagtctcaatttacagtcaggaacagaaaacactagtattgaaaatttt
tcagtcgggttgatgcactacaatgccattttgccagatgtaactttacgggtaggagaa
tgggctttgttggctcctaactccattgctcctcgtgtttgggatgctacagcagcaatg
gctgatcgtatggcatattgggctgaaaacaactggacaatcaatactgaagctaactta
gatcaatatacttttagtgtggctggggcagtagggttacttttgtctgacttgtgggcc
tggtacgatgggactcaaactaaccgaacctatgctattggatttggtcgagggttacaa
gcggttaatattgtccgtaatcatcgcgaagatctgaaacgtggagtgaatttcctgccc
caaggatggctagaacaagatgttcatcaatatgctcgtcgtaaccttacgttagctgat
tactatactaagtctttgcccccaggaccggccttgaatttctgtaaaattcctttggca
ttggcttatggaactctagaggtgatggctttaggcaaaaaaaaactaagccgtagtgat
gttattgctttagtccaacaagtaactggttga
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