Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1068
Help
Entry
RGRSB_1068 CDS
T05747
Name
(GenBank) putative carotenoid isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00906
Carotenoid biosynthesis
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RGRSB_1068
Enzymes [BR:
cer01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
RGRSB_1068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
FAD_oxidored
Thi4
FAD_binding_3
Pyr_redox_2
GIDA
GMC_oxred_N
GDI
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BBA79555
UniProt:
A0A2Z5TJH0
LinkDB
All DBs
Position
1677701..1679263
Genome browser
AA seq
520 aa
AA seq
DB search
MDDGETMIGQNEPSTRVSTSRGKTPDYDVIVIGSGIGGLVTATQLAARGAKVLVLERYLI
PGGSAGYFEREGYRFDVGASMIFGFGSEGTTNLLTRALEAVDVGLETIEDLVQIHYHLPQ
GLDLKVHRDYEKFLEELITKFPQERTGIRRFYDECWKVFNCLNSMELLSLEEPRYLTRVF
FQNPRACLELIKYLPQNVGEIARRYISDLQLLKFIDIECYCWSVVRSDLTPMINAGMVFS
DRHYGGINYPKGGVGQIAQKLVEGLEKVRGKIQYKARVTKILLEKKKAVGVELASGQQYF
AKHIVSNATRWDTFEKLLPSKVMPTREKRWRNRYQKSPSFLSLHLGVKADLLPPQTECHH
ILLENWDKMEAEQGTIFVSIPTLLDPSLAPRDRHIIHIFTPSWIKGWQGLSAREYQKQKK
RATNDLIERLEAIFPGLNQALDHKEVGTPRTHRRFLGRDDGTYGPIPKRKLAGLWGMPFN
QTTITGLYCVGDSTFPGQGLNAVAFSGFACSHLISVDLGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggagaaacaatgatcggacaaaacgagccttcaacaagggtatctacaagc
agggggaagactccggactatgatgtcattgtgattggctcaggaattggagggttagtc
actgccactcagttagcagccaggggagcaaaagtcctagtattagaacggtatttaatt
cctggaggaagtgcgggatattttgaacgggaaggatatcgttttgatgtgggtgcgtct
atgatttttgggtttggtagcgaaggaacgaccaacttactcactcgtgccctagaagcc
gttgacgttggtttggaaacaattgaagatcttgtacagattcattatcatttgcctcaa
ggattagacctaaaagttcatcgagactatgagaaatttttagaagaattaatcactaaa
tttccgcaagaaagaacaggaattcgccgtttttacgatgaatgttggaaagtatttaat
tgtcttaattctatggagttactttccttagaagaacctcgttacttaacacgggtcttt
ttccaaaatcctagggcctgtttggagttgattaaatatttaccgcaaaatgtgggagaa
attgccagacgctacatcagtgatctccaactattaaaattcattgatatagaatgttac
tgctggtcagtggttcggtctgatctcaccccgatgatcaatgcggggatggtattttct
gaccgtcattatggaggaattaattatcctaaagggggagtaggacaaattgcccagaaa
ttagtggaaggacttgaaaaagtgaggggaaaaattcagtataaggctagagttaccaaa
attttgctagaaaagaagaaagcggtgggcgtagaattagccagcggtcaacaatatttt
gctaagcatattgtttctaatgccactcgctgggatacttttgaaaaattattgccctcc
aaagtaatgccgactagggaaaaacgatggaggaatcgttatcaaaaatcccccagtttt
ctcagtttacatttaggagttaaagctgatttgttgcctcctcaaaccgaatgtcatcac
attttgttggaaaattgggataagatggaagctgaacagggaacgatttttgtttctatt
cctacgcttcttgatccgagtttagctcctcgtgatcgtcatattatccacatatttacc
ccaagctggattaaaggatggcaaggactttctgctagagaataccaaaaacaaaaaaaa
agagctactaatgacttaattgaaaggttagaggcaatttttccaggtttaaaccaagct
ttagaccataaagaagtgggaactccccgtactcatcgacggtttttaggacgagatgac
ggaacctatggacccattccaaagcggaaattagcagggttgtgggggatgccttttaac
caaactacaattactggactttattgtgtgggagacagcacttttcccggacaagggtta
aatgcagttgccttctcagggtttgcttgcagccatcttatctccgttgatctaggttta
taa
DBGET
integrated database retrieval system
