Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1076
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Entry
RGRSB_1076 CDS
T05747
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cer03019
]
RGRSB_1076
03009 Ribosome biogenesis [BR:
cer03009
]
RGRSB_1076
03036 Chromosome and associated proteins [BR:
cer03036
]
RGRSB_1076
Enzymes [BR:
cer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RGRSB_1076
Messenger RNA biogenesis [BR:
cer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RGRSB_1076
Ribosome biogenesis [BR:
cer03009
]
Eukaryotic type
90S particles
RNase
RGRSB_1076
Prokaryotic type
rRNA processing factors
RGRSB_1076
Chromosome and associated proteins [BR:
cer03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RGRSB_1076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BBA79562
UniProt:
A0A2Z5SX31
LinkDB
All DBs
Position
complement(1689031..1689726)
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AA seq
231 aa
AA seq
DB search
MTIFLRFKNQALLDCALTHRSYVNEHRDVTEHNERLEFLGDAVLQFVVSEELYRCHPELS
EAQLTRLRSKLVDEPQLAKFAKILDLGEFMYLGQGAIKDGGQNNPALLSDTFEAIVGAYF
LDAGIEAVQGFVRSLFKDAIDTLIVPESKKVSSKIIDVKNRLQEWALANYKKVPEYFLIE
ELGPDHAKEFIFGVQINEQLLGTGKGRRKQAATKAAAQDALNKLSIFDELG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactatatttcttcggtttaaaaatcaagcgttattagattgtgcgttaacccaccgt
tcttacgttaacgaacatcgtgacgttacagaacataatgaacgcttagaatttttgggt
gatgcagtattacaatttgtcgtaagtgaagaactctatcgatgtcatcctgaattaagc
gaggcacaactgactcgtttgcggtcaaaattagttgatgaacctcaattagctaaattt
gcaaagatcttagacttaggagaatttatgtatcttggacaaggggcgatcaaagatggg
ggacagaacaatcctgctttattgagtgatacctttgaagctatagtaggtgcatatttt
cttgatgcaggaatagaggcggtacaagggtttgtgcgatcactctttaaagatgcaatt
gatactctaatagtccctgagtcaaaaaaagtttctagtaaaattattgatgtaaagaat
cgtcttcaagaatgggcattagctaactacaaaaaagtacctgaatactttttaattgag
gaattaggacctgatcatgcaaaagagtttattttcggtgtacagattaatgagcaactg
ttaggaacgggaaaaggtcgccgcaaacaggcagcgactaaagccgctgcccaagatgct
ttaaataaattgtcaatttttgatgaattaggatag
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