Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1099
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Entry
RGRSB_1099 CDS
T05747
Name
(GenBank) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00240
Pyrimidine metabolism
cer00670
One carbon pool by folate
cer01100
Metabolic pathways
cer01232
Nucleotide metabolism
cer04981
Folate transport and metabolism
Module
cer_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RGRSB_1099
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RGRSB_1099
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RGRSB_1099
Enzymes [BR:
cer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
RGRSB_1099
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PterinBD-DUF4346
Thymidylat_synt
MtrA
ZNHIT3_C
Motif
Other DBs
NCBI-ProteinID:
BBA79584
UniProt:
A0A2Z5T981
LinkDB
All DBs
Position
complement(1716976..1718481)
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AA seq
501 aa
AA seq
DB search
MRITQSKCKVEYIPHYQPNQLICGYGRTAIITGWTVRQSIAKRLNSEDYAVIGNLYSPTR
GISPLIRNLLANPHVRYLVILQATKEDKNAGGCRCLLDFLRQGFRQGISDTGRNIWVINS
KITGYVDIEIPADILENLRRSLKYQEAISIEKAMNIIQEFNQLKIEPWGEPLTFPERESY
PTVLPGPRYGHRIEGKTIAETWVKILHRIKTIGTIRQTMYGQWQELIDLIAIVTDEPPEF
YFPEPNYLPIKRSFLKDYIEQILDDAPQREGVKYTYGQRLRSWFGRDQIEQLINKLVEDI
HSSRAVMSLWDVSDYEDSDSPPCLNHIWVRIVDNELSLTATFRSNDMFSAWPANAMGLRF
MQQFIQDKVIKKSDHNLTLGPLIIISQSAHIYNDCWEHTQQIIDTEYTKRNQKRNFDDPS
GSFLISVKDNRIVVEHLTPGSGEIVNCYSGKLARQLYQKIALNSPSIQIEHAMYLGTELQ
KAELCLVNKLNCYQQDIPLIF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcactcaatcaaaatgtaaagttgaatacattcctcattatcaacctaatcaa
ctgatctgtggttatggacggactgccatcatcactggatggacagttcgacagtcaata
gctaaacgtttaaactcagaagactatgcagttattggtaatttgtatagtcctactagg
ggaattagtcccttaattcgtaatttattagctaatcctcatgtccggtatttagtaatt
ttgcaggcaacaaaagaagataaaaatgctggaggatgtcgatgtttattggatttttta
cgacaaggttttagacaaggaattagcgatacaggcagaaatatatgggtgattaattct
aagattactggatatgttgacattgaaattcctgctgatatcttagaaaatttacgtcgt
tctttaaaataccaagaagcaatatcaattgaaaaagcaatgaatataatccaagaattt
aatcaattgaaaatagaaccttggggagaaccgttaacttttcctgaaagagaaagttat
ccaacagttttaccaggtcctagatatggtcatcgaattgaaggaaaaactattgcggaa
acctgggttaaaatattacatagaattaaaacaataggaacaattagacaaacaatgtat
ggacaatggcaagaattaattgatctaatagctattgttaccgatgaaccaccagagttt
tattttcctgagcctaattatttacctattaaaagaagttttctcaaagattatattgaa
caaatcttagacgacgcgccccaaagagaaggagtaaagtatacatacggacaacgctta
agatcatggtttggacgagatcaaattgaacaactaattaataaattggtagaagatatt
cactcatcaagagccgtcatgtcattgtgggatgtaagcgattatgaagatagcgatagt
cctccttgtctcaatcatatttgggtgagaattgttgataatgaattatccttaactgct
acatttcgtagcaatgatatgttttctgcttggccagctaatgcaatgggattaagattt
atgcagcaatttattcaagataaagttatcaaaaagtcagatcataatttaactttaggt
cctctaatcattattagtcaaagcgcgcatatttataatgactgctgggaacatacacaa
caaattattgataccgaatatacgaagaggaaccagaaaagaaattttgatgaccccagt
ggtagctttttaatttcggtcaaggataatcgtattgttgttgaacatttaactccaggg
tcaggagaaattgtcaactgctattcaggtaaacttgctcgtcaactgtatcagaagata
gccttaaattcccctagcattcaaattgaacatgcgatgtatttagggacagaattacaa
aaagcagaattatgtttagttaacaaactaaattgttatcaacaagatataccactaatt
ttttaa
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