Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1102
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Entry
RGRSB_1102 CDS
T05747
Symbol
clpB1
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cer03110
]
RGRSB_1102 (clpB1)
Chaperones and folding catalysts [BR:
cer03110
]
Heat shock proteins
HSP100
RGRSB_1102 (clpB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
NBD_SMAX1
nSTAND3
AAA_14
AAA_7
AAA_24
IstB_IS21
AAA_18
AAA_28
ATPase_2
TniB
Roc
Zeta_toxin
RuvB_N
RNA_helicase
ResIII
RsgA_GTPase
ABC_tran
bpMoxR
AAA_19
DNA_pol3_delta2
Torsin
Motif
Other DBs
NCBI-ProteinID:
BBA79587
LinkDB
All DBs
Position
1722076..1724694
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AA seq
872 aa
AA seq
DB search
MQPTNPNQFTEKAWEAIVRTPDIAKQHSHQQIESEHLMASLLELEGLATSVFNKADISIQ
RLQDQTEKFIRRQPKVSNLGKSIYLGRSLDSLLDRAEQFRKDFGDDYISVEHLLLAYAKD
DRFGQALLQEFGINETRLKEIIQQVRGNQKVTSQNPEETYESLEKYGRDLTQLAREGKLD
PVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLRDRKLI
ALDMGALIAGAKYRGEFEERLKAVLKEVTDSQGNIIMFIDEIHTVVGAGATQGAMDAGNL
LKPRLARGELRCIGATTLDEYRKYIEKDAALERRFQEVIVNEPNVVDTISILRGLKERYE
VHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESAAKLKMEITSKPEELDEVDRK
VIQLEMERLSLQKEVDIVSIERLEKLEKELADLKEEQSQLNAQWQSEKEAIDEISKIKET
IDQINLEIQQAERDYDLNKAAELRYGKLTDLQRQIKELEIKIAERQTTGKTLLREEVLES
DIAEIISKWTGIPISKLVESEKEKLLYLEDEIHKRLIGQEEAVTAVSEAIQRSRAGLSDP
NRPTASFIFLGPTGVGKTELAKTLAENLFDTEEALVRIDMSEYMEKHTVSRLMGAPPGYV
GYDEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDAQGHVVDFKNTII
IMTSNIGSQYILDVAGDDSLYEEMRSRVMDAMRHSFRPEFLNRIDEIIIFHGLQKCQLQK
IVDRQIQLLRTRLAEQKISLNLSELALNFLAEIGYDPVYGARPLKRAIQKYLETAIAKSI
LRGEFKAGDTIFVDLENERLTFKCLFDDKQIV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgactaatcctaatcaatttaccgaaaaggcatgggaggctattgttcgaact
cccgatattgctaaacaacatagtcatcaacaaattgaaagcgaacacttgatggcatct
cttctcgaactagaagggttagctaccagcgtctttaataaagcggatattagtattcaa
cgtctgcaagaccagaccgaaaaatttatccgtcgtcaacccaaagtatctaaccttggc
aaatctatttatttaggacggagcctagatagtcttcttgacagggctgaacaatttcgt
aaagactttggagatgattatatttctgttgagcatttgctgttagcttatgctaaagac
gaccgttttggtcaggctttactacaagaatttggtatcaatgaaactcgattaaaagag
attattcaacaagtcagaggaaatcaaaaagtgactagtcaaaaccctgaagagacatat
gaatcgttagaaaaatacggtcgggatttaacccaattagcgcgagaaggtaaacttgat
ccggttattggacgagatgacgaaatccgtcgaactattcaaattctttctcgtcgaact
aaaaataaccctgtcttaattggggaacctggagttggtaaaactgctattgttgaaggg
ttagcacaacggattattaaccgtgatgtccctgaatctttgcgagaccgaaagttaatt
gccttggacatgggagcattaatcgccggggcaaaatatcgcggagaatttgaagaacgt
cttaaagcagttctcaaagaagttacagattctcaagggaatattatcatgttcattgac
gaaattcacaccgtcgttggagcgggagcaacacaaggagcgatggatgcagggaacctc
ctaaaacccagattagcacgaggagaattgcgctgtattggggcaacaacccttgatgaa
tatcgtaaatatatcgaaaaagatgctgctttagaacggcgtttccaagaggtcatagtt
aatgaaccaaatgtagtcgatactatctctattttacggggacttaaagaacgttatgaa
gttcatcacggagtaaaaattgccgataccgctttagttgctgcggccatgttatctaac
cgttatattagtgatcgttttttgccagataaggctattgacctagtagatgagtcagcc
gctaaattaaaaatggaaatcacttctaaacctgaagaattagatgaagtggatcgcaaa
gttattcagttagaaatggaacgattatctttacaaaaagaagtagatatcgtctctata
gaaaggttagaaaaacttgagaaagaacttgcagatctcaaagaagaacaatctcaactt
aatgctcaatggcaatcagaaaaagaggctattgatgaaattagtaagatcaaagagact
atcgaccaaatcaacttagaaattcaacaagcagaacgagattatgatcttaataaagca
gcagaattacgatatggaaaactaacagatttacaacgacagattaaggaacttgagata
aaaattgcagaacgtcaaacgactggaaaaactttattacgagaagaagttttagaatca
gatattgctgagattatttctaaatggacaggaatccctattagcaaattggtggaatca
gagaaagagaaattactttatttagaagatgaaatccataaacgattgattggacaagaa
gaggctgtaacagctgtctcagaagctattcaacgttcacgtgctgggctttctgatcct
aaccgtcctactgcaagttttatttttcttggacctacaggggttggtaaaacggaattg
gccaagacattagccgagaatctttttgatacggaagaagctttagtccgcattgatatg
tctgaatatatggagaaacatacagtatcccgtttaatgggtgcgcctccggggtatgtt
ggctatgatgaaggaggacaattaactgaagctattcgtcgtcgtccttactctgtaatt
ctgtttgatgaaatcgagaaagcccataatgatgtttttaatgtcatgttacaaattctc
gatgatgggcgattaactgacgctcaaggtcatgtagtagatttcaagaatactattatc
atcatgaccagtaatattgggtcgcaatacattttagatgtggctggagatgattctctt
tatgaggaaatgcgttcccgtgtgatggatgcaatgcgtcatagttttcgtcctgaattt
cttaatcgtatcgatgaaatcatcatcttccacgggttacagaaatgtcaattacaaaag
attgttgacaggcagattcagttattaagaacacgattagctgagcaaaaaatcagcctg
aacttatcggaattagctttaaattttctagcagaaataggctatgatccagtgtatggt
gcaagaccattaaaacgagcaattcaaaaatatttagaaactgcgatagctaagtcaatt
ttgcggggagaatttaaagcaggagatactatttttgtagatctagaaaatgaacgactg
acgtttaaatgtttgtttgatgacaagcaaatagtttaa
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