Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1206
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Entry
RGRSB_1206 CDS
T05747
Symbol
rbcR
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cer03000
]
RGRSB_1206 (rbcR)
Transcription factors [BR:
cer03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RGRSB_1206 (rbcR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
SBP_bac_11
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BBA79669
UniProt:
A0A2Z5SXU3
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All DBs
Position
1873317..1874246
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AA seq
309 aa
AA seq
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MIQATLHQLKVFETMARHGSFTRAAEELLITQPTVSSQIKQLTKVIGLPLFEQIGKRLYL
TEAGKELLQTCQEIFGRLENFEMKVADLKGTRQGQLRLAIITTAKYFIPRILGTFCQQYP
GIDISLNVTNHQHIQERMMENRDDLYVVSEPPDGMGLSTQPFLDNNLVVIAPKNHPLAGK
QNIPITNLDDEVFIMRESGSGTRRAIQKLFYQHGLSVEVRLELGSNEAIKHAIAGNLGIS
ILSQHTLISEGKDSELTILDVEHFPIRRRWYVAYLEDKQLSVVAQAFLDYLLQENANFSV
PPVSLLAKA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgattcaagccaccctacatcagttaaaagtctttgagactatggcccgtcatgggagt
tttacccgtgcagcagaagaattgttaattactcaacctacagtatcaagtcaaattaaa
caactaacaaaagtcattggtctaccgttgtttgaacaaattggcaaacgtctttatcta
actgaagccggaaaagaattacttcaaacatgtcaggagatctttggaaggttagaaaat
tttgagatgaaagtagcggacttaaaaggaacccgacaaggacaattaagattagcaatt
attaccacagcaaaatattttattcctcgaattttaggtacattttgccaacaatatccc
ggcattgatatctccttaaatgtcaccaatcatcaacatatccaggaacgtatgatggaa
aaccgagatgatttgtatgttgtaagtgaacctcctgatggcatgggattatcaactcaa
ccttttcttgataataatttagtagtgattgcccctaaaaaccatccattagcgggaaaa
caaaatattcctatcaccaatcttgatgatgaagttttcatcatgcgtgaatcaggctca
gggactcgacgggcaatacaaaagctgttctatcaacatggtttatctgttgaagtacgc
ctagaattaggaagtaatgaggcgattaaacatgcgatcgcaggtaacctagggatttct
attctttctcaacatacgcttatttctgagggaaaggatagtgaactaactatacttgat
gtggaacattttccgatcagacgtcgttggtatgtagcatatttagaagataaacaacta
tcagtggtagctcaagcgtttttagactatctacttcaagagaacgcgaatttttctgtc
cctcctgttagtctcctagcaaaagcttga
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