Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1255
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Entry
RGRSB_1255 CDS
T05747
Symbol
secD
Name
(GenBank) preprotein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer03060
Protein export
cer03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RGRSB_1255 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RGRSB_1255 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cer02044
]
RGRSB_1255 (secD)
Secretion system [BR:
cer02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RGRSB_1255 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
Sec_GG
Vut_1
Phage_holin_3_6
DUF6338
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
BBA79714
UniProt:
A0A2Z5T9R5
LinkDB
All DBs
Position
complement(1960476..1961888)
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AA seq
470 aa
AA seq
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MQQQRLVLGLIAALAIGAIAILVAIPLQLGLDLKGGAQLTIQVKPTGKIQNISPEDLEAQ
KVVLGNRVNALGVAEPIVQTLGQDKIVIQLPGVTDSQQAERVLGGTAQLEFREQKQGTEG
QFQAEFTIKRQLEVELAILRRDGTLEENSERVIELTQSIKQSNLAILDLFESVDLNGKNL
KNARPSPTQAGTSWEVAIEFDNDGGKKFAELTKNLAGTGRSIGIFLDDTLISAPIVGVEF
ANTGITGGSAVITGNFTIDSANELAVQIRGGSLPFPVEVVENRTVGATLGQESIRSSIYA
GVAGLILVLIFMAIYYRLPGMIANLALGVYTLYTLAFYALIGVTLTLPGIAGFILSIGMA
VDANILIFERTREELRSGNSLYRSVESGFNRAFSSILDSNVTTLIACSALFGLGSGLVKG
FALTLAIGVLVSMFTAVTCSRTLSLLTVLGLPSVRKKPELFCPNLPKTVN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacagcgtttagtccttggtttaatcgccgccctagctattggggcgatcgcc
attttagtagctattcccctacaattagggttagaccttaaaggaggggcgcagttaact
attcaagttaaacccactggcaagattcaaaacatcagtccagaagacttggaagcacag
aaagttgtgttggggaatagggttaacgctttgggggtagctgaacccattgtgcaaacc
ctaggacaagataaaatcgttatccagttaccaggggttactgattctcaacaagctgaa
cgggtgctaggaggaaccgcccaattggaatttcgagaacaaaaacaaggaactgaaggt
cagtttcaagcggaatttacgattaaacgacaattagaagtagaattagcaattctaagg
cgtgatggcacattagaggaaaattctgaacgtgttatcgaattaactcaatctattaaa
caatctaaccttgctatcttagatttgtttgaatcagtcgatttaaacggaaaaaacctc
aagaatgctcgtcctagtcccacccaagcaggaactagttgggaggtggctatcgaattt
gataatgacgggggcaaaaaattcgccgaactcacgaaaaatctggcgggaactggtcgt
agtatcggaatttttctagatgatacactgattagtgctccaattgtaggtgtagagttt
gctaatactgggattacgggaggtagtgctgtcatcacagggaattttactattgatagt
gccaatgaactcgccgttcaaattcgcgggggatctttaccatttccggtagaagtggtg
gaaaaccgtactgtcggggcaactttaggacaagaaagcatccgaagcagcatttatgct
ggggtggctgggttgatccttgtgttaatcttcatggcgatttattatcgccttcctggg
atgattgctaatttggccttgggggtttataccttatacacattagctttttacgctttg
attggcgttaccttaacgttacctggaattgccggatttatcttaagtattggtatggct
gtagatgcaaatatactaattttcgaacggactcgtgaagaattaagatctggaaatagt
ctttatcgctctgtagaatctggatttaatcgcgcattttctagtattttagacagtaat
gtcactactttgattgcctgcagtgctttgtttggattgggatcgggattggttaaagga
tttgccctcacccttgctattggcgtattggtaagtatgtttacggcagttacttgtagc
cgaactctttcattactaacggtattaggattgccctcagtccgtaaaaaacctgaacta
ttttgtcctaatctacctaaaaccgttaattaa
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