Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1334
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Entry
RGRSB_1334 CDS
T05747
Name
(GenBank) quaternary amine ABC transporter substrate-binding protein
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGRSB_1334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cer02000
]
RGRSB_1334
Transporters [BR:
cer02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
RGRSB_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
PrgI
Motif
Other DBs
NCBI-ProteinID:
BBA79783
LinkDB
All DBs
Position
2083180..2084742
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AA seq
520 aa
AA seq
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MTDFFFISFIPELLQRIVEHLILVLIAMGIAILIGIPLGILITRYPKLANYIFFIVNSVQ
TVPSLAMFGFLITVPVIGGIGKKPAIFALILYALLPIIQNTYIGMIQVDKGVIEAGKAMG
MTDQQTLLLIEIPLAVGMILAGVRVSIVICVGVATIAAAIGGGGLGVFIFRGISMVNNQL
ILLGAIPAVLIALVADWGISSLEKSLTQYEKSRTKSKKSVLIIWGVVVGILLSLFGIIYK
QLFLGSQESETVVIGSKNFTESIILGEFLAQNIEIRTSLHVERKFNLGGTFICHEAVKNR
QIDGYVEYSGTAFTAILNQKPISNSKQLYQQVKVAYNKKFNLEVMPSLGFKNTYAILIRQ
QDAEKYNIKTISEVSKYTPKWQAGFGYEFLTREDGYPGLAKIYNLNFDLPPNTVDLGLIY
RVLANKKVDLVAGNSTDGSIPILKLTILEDDKNYFPPYEAIPIFNKETLQKYPQIKTVIQ
QLAGQISTSAMQQLNYQVDNSQGSVTEVVHNFLIKNRLKP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttttctttatttcttttattccagaacttctacaacgaattgtagagcat
ttaattctagttctcattgctatgggaatagcgattttgataggtattcctctcggtatt
ttgatcacccgatatcctaaattagcaaattatattttttttatcgtgaactctgttcaa
acagttcctagtcttgccatgtttggctttttgattaccgttcctgtgataggaggaatc
ggaaaaaaacctgctatctttgccttaattctttatgctttacttcctattattcagaat
acttatattggaatgatacaagttgataaaggagttatagaagcaggaaaagcaatgggt
atgacggatcaacaaacattgttattgattgaaatcccacttgctgtaggtatgatacta
gcaggagtaagagtctctatagtaatttgtgtgggtgttgccactattgctgctgctatc
ggtggaggaggcttaggggtttttatttttcgaggaatttcaatggttaataatcaatta
attttattgggtgcaattccagcggtcttaattgccttagtagctgattggggaattagt
tcgttagagaaatccctaacgcagtatgaaaaatcacgaactaaatctaaaaaaagtgtt
ttaattatctggggcgtagtagtaggaattttattaagtttatttgggataatctacaaa
cagttatttttaggaagtcaggaaagtgaaactgtagtaattggctctaaaaattttaca
gaaagtattattctaggagaatttttagctcaaaatatcgagataagaactagtcttcat
gtggaacgtaaatttaatttaggaggaacttttatctgccatgaagcagttaaaaatcga
caaattgatggttacgtcgaatatagtgggactgctttcacagcaattcttaatcaaaaa
ccgattagcaattccaaacaactgtatcaacaagtcaaagtagcttacaataaaaaattt
aatttagaagttatgccttctttaggatttaaaaatacctacgctattttaattcgtcaa
caggatgcagagaaatataatataaaaactatttcggaagttagtaaatatactcctaaa
tggcaagctggtttcggctatgaatttttaactagagaagacggctatccaggattagct
aaaatttataacttaaattttgaccttccccctaatactgtagatctaggtttaatatat
cgtgtcttagctaataaaaaagtggatctagttgctggaaactctaccgatggctcaata
cctattttaaaattaacaatattagaagacgataaaaattattttcctccttatgaagca
attcccatttttaacaaagaaaccctccaaaaatatccccagataaaaacagtaattcaa
caattagctggacagatttctacctcagcaatgcagcaattaaattatcaagtagacaat
agtcaaggatcagttactgaagtggtacataactttttaatcaaaaataggttaaagcct
taa
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