Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1385
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Entry
RGRSB_1385 CDS
T05747
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RGRSB_1385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cer03019
]
RGRSB_1385
03009 Ribosome biogenesis [BR:
cer03009
]
RGRSB_1385
03036 Chromosome and associated proteins [BR:
cer03036
]
RGRSB_1385
Enzymes [BR:
cer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RGRSB_1385
Messenger RNA biogenesis [BR:
cer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RGRSB_1385
Ribosome biogenesis [BR:
cer03009
]
Eukaryotic type
90S particles
RNase
RGRSB_1385
Prokaryotic type
rRNA processing factors
RGRSB_1385
Chromosome and associated proteins [BR:
cer03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RGRSB_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BBA79823
LinkDB
All DBs
Position
complement(2170536..2171528)
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AA seq
330 aa
AA seq
DB search
MEWKPTYLQDKIGVRFKNSALLFESLIHPSYAQQVNRSENNNERLEYLGEKILEFIITNY
LYQNCSYLAVSKLTTLRNKLEEKEKLTDLWFKLGLGESFPFLAVKDERHYLRIKRNNPFE
KALKALVGAMHLDRGSSQTFNWVKKQLIAPLLARHLKNIKDRLDHEKQLEFLGEALFNAI
VADYLYRLFPYVNTCFLSKITKKLVVKEQQNKYINQLTSEDWKIIDTENEKINRKSFTSL
LAAIYIHFDQQNSKISFRETGSWWINKSIDEDEIWRELINLLIKDGVSQKWIIRQVMGYE
SKDYNEGRERFHELMKSSKIDNEIKIGDHY
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaatggaaacctacctaccttcaagataaaattggtgttcgcttcaaaaatagcgct
cttctctttgaatctctgattcatccgtcttacgctcaacaagtcaaccgatccgaaaat
aataatgagcggctagaatacttaggggagaaaattctagaatttattattacaaattat
ctctatcaaaattgttcctatttagcagtaagcaaactgactactttgcgaaataaatta
gaagaaaaggaaaagttgactgacctttggtttaaattagggttaggagaaagtttccct
tttttggctgtaaaagatgaacgacattacctccggatcaaacgaaataatcctttcgaa
aaggctctcaaagcattagtaggagccatgcatcttgaccgaggttcatctcaaactttt
aattgggttaaaaaacaattaatcgctccattattagcccgtcacttgaagaatattaaa
gatagattagaccacgaaaaacaacttgaatttttaggagaagccctatttaacgcaata
gttgctgactatttatatcgacttttcccttatgtcaatacttgttttttaagtaaaatt
accaaaaagttagtagtcaaagaacagcaaaataaatatattaatcaactcacttcagaa
gattggaaaattattgatactgaaaacgaaaaaataaatagaaaatcatttaccagcttg
ttagctgctatatatattcattttgatcaacaaaacagtaaaataagctttcgagaaaca
ggtagttggtggattaataaatctattgatgaagatgaaatttggcgtgaattgattaat
ttgctcatcaaagatggagtttctcaaaaatggattattcgtcaggtaatgggatatgaa
agtaaagattataacgaaggacgtgaacgttttcacgaactaatgaaatcttcgaaaatc
gataatgaaataaagatcggcgatcattactaa
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