Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1416
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Entry
RGRSB_1416 CDS
T05747
Symbol
ndk
Name
(GenBank) nucleoside diphosphate kinase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00230
Purine metabolism
cer00240
Pyrimidine metabolism
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
cer01232
Nucleotide metabolism
cer01240
Biosynthesis of cofactors
Module
cer_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
cer_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
cer_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
cer_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
cer_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RGRSB_1416 (ndk)
00240 Pyrimidine metabolism
RGRSB_1416 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cer04131
]
RGRSB_1416 (ndk)
Enzymes [BR:
cer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
RGRSB_1416 (ndk)
Membrane trafficking [BR:
cer04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
RGRSB_1416 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
BBA79850
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All DBs
Position
2213874..2214305
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AA seq
143 aa
AA seq
DB search
MVKPDGVQRGLIGEVISRFEAKGFTLVGLKLVQVSKELAEEHYDVHKERPFFRSLVEFIC
SSPVVAMVWQGNGVVASARIVIGATNPLTAAPGTIRGDYGISIERNLIHGSDAIETAEKE
ISLWFNNKELGSWEPTMTPWLHE
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacccgatggagtacaacgtggcttaattggcgaagtcatcagtcgttttgaa
gccaaaggctttacccttgtaggactcaaacttgtgcaagtctctaaggaattagctgaa
gaacattatgatgttcataaagaacggcctttttttagaagtttagtcgaatttatctgt
tcttcgccagtagtagccatggtgtggcaaggaaacggggtggtagcttctgctagaatt
gttattggagcaacaaatcccctaacggctgcgccaggaaccatcaggggtgattatgga
ataagtattgagcgtaatctgattcacggttctgatgctattgaaactgctgaaaaagaa
attagtctctggtttaataacaaggaattaggcagttgggaacctactatgacaccttgg
ttgcatgagtag
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