Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1884
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Entry
RGRSB_1884 CDS
T05747
Symbol
groEL2
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGRSB_1884 (groEL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cer03019
]
RGRSB_1884 (groEL2)
03110 Chaperones and folding catalysts [BR:
cer03110
]
RGRSB_1884 (groEL2)
03029 Mitochondrial biogenesis [BR:
cer03029
]
RGRSB_1884 (groEL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cer04147
]
RGRSB_1884 (groEL2)
Enzymes [BR:
cer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RGRSB_1884 (groEL2)
Messenger RNA biogenesis [BR:
cer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RGRSB_1884 (groEL2)
Chaperones and folding catalysts [BR:
cer03110
]
Heat shock proteins
HSP60 / Chaperonin
RGRSB_1884 (groEL2)
Mitochondrial biogenesis [BR:
cer03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RGRSB_1884 (groEL2)
Exosome [BR:
cer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RGRSB_1884 (groEL2)
Exosomal proteins of other body fluids (saliva and urine)
RGRSB_1884 (groEL2)
Exosomal proteins of breast cancer cells
RGRSB_1884 (groEL2)
Exosomal proteins of colorectal cancer cells
RGRSB_1884 (groEL2)
Exosomal proteins of bladder cancer cells
RGRSB_1884 (groEL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7127
CitX
Motif
Other DBs
NCBI-ProteinID:
BBA80251
UniProt:
A0A2Z5T100
LinkDB
All DBs
Position
complement(2901511..2903196)
Genome browser
AA seq
561 aa
AA seq
DB search
MAKIVSFSDESRRALEKGVNSLANAVRITLGPKGRNVLLEKKFGVPQIVNDGITVAKEIE
LEDPLENTGARLLQEIASKTKEVAGDGTTTATVIGQALIREGLKNVIAGANPVALRRGIE
KTTAYLVKEIELVAKPVKGDAIAQVATISAGNDVEVGKMIALAMDKVTTDGVITVEESKS
LTTELEVVEGMQIDRGYLSPYFISDPERQLVDFEKPLILITDKKISAIADLVPILENVAR
AGSPLLIIAEDIEGEALATLVVNKARGVLNVAAVKAPAFGERRKAVLQDLAILTGGSVIS
EDVGLSLDSVSIDMLGQAARVTIEKDNTTIVASGEHKAKAAVEKRVAQLRKQLEETDSDY
DREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLV
HLANKIAAFKATLTNPEEQVAANIFINALEAPLRQLADNAGVEGSVIVESVRNTEFNVGY
NAITGKLENMIEAGILDPAKVVRSALQNAASIAGMVLTTEALVVEKPEPDPPAAPDMGGM
GGMGGMGGMGGMGGMGGMGMM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattgtttcattcagcgatgaatcgagacgggcattagaaaaaggggttaat
tccctagctaatgcagttcgcattaccttgggtccaaaaggccgtaatgtcctcctcgaa
aaaaaatttggagtaccccagatcgttaacgatggaattaccgtcgccaaagaaattgag
ctcgaagatcccttagaaaatacaggagctagacttcttcaagagatagcctccaaaact
aaggaagtggctggagacggaaccacaactgctactgttattggtcaagccttaattcgg
gaagggttaaaaaatgttattgctggagccaacccggttgccttacggcgtggcattgaa
aagactaccgcttatcttgtcaaagaaattgaattagtggctaaacccgtcaagggagat
gctatcgctcaagtggctactatctcggctggtaacgatgtcgaagtcggcaagatgatc
gccttagcgatggataaagtcaccactgatggggtgattactgtggaagaatccaagtcc
ctaactaccgaattagaagtggtggaagggatgcaaattgatcgtggttatctttctcct
tacttcatcagtgatcctgaacggcaactggtagactttgaaaaacctttgatcctgatt
actgacaaaaaaatcagtgcaatcgccgatctagttcccatccttgaaaatgttgctcgc
gccggaagtcctctactcataattgcagaagacatagaaggggaagccttagctaccttg
gttgttaataaagctcgcggagttctcaatgtagcagctgttaaagctcctgcctttggg
gaacgccgtaaagctgttcttcaagatcttgccattctcactggtggtagcgtcatttct
gaagatgtagggttaagtcttgattcggtttctatcgatatgttgggacaagccgctaga
gtgactattgaaaaagataacaccactattgttgctagtggcgaacataaagcaaaggct
gccgtcgagaaacgggtcgcccaacttcgtaaacaactagaagaaactgactctgactac
gatagagaaaaacttcaagaacgaattgcgaaattagctggaggtgtagccgttattaag
gtgggagccgccactgaaacggaactaaaagatcgcaaacttcgtattgaagatgccctt
aacgcaactaaagcggcagtcgaagaaggtattgttccagggggaggaaccactttagtt
cacttagctaataagattgctgcattcaaggcgactttaaccaaccctgaagagcaagtg
gcagccaacatcttcatcaatgccttggaagcccctctgcgtcaattagcagataacgct
ggagttgaagggtcagttattgttgaaagcgtccgcaacacagagtttaatgtgggttat
aacgctatcacaggcaagcttgagaatatgattgaagctggtatccttgaccccgccaag
gttgttcgctctgctttacaaaatgccgcttctattgctggcatggtattaactactgaa
gcgttagtggttgagaaaccagaaccagaccccccagcagctcctgatatgggcggcatg
ggcggcatgggcggcatgggcggcatgggcggcatgggcggcatgggcggcatgggtatg
atgtaa
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