Chanodichthys erythropterus (predatory carp): 137002325
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Entry
137002325 CDS
T10334
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137002325 (tnn)
04518 Integrin signaling
137002325 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137002325 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137002325 (tnn)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137002325 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Fn3_VIN3
Interfer-bind
Fn3_Dep-1_2nd
DUF7949
NDNF
DUF4998
SdrD_B
EGF
Motif
Other DBs
NCBI-GeneID:
137002325
NCBI-ProteinID:
XP_067217976
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All DBs
Position
16:complement(34447377..34484969)
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AA seq
932 aa
AA seq
DB search
MIVRFSRLKRGLFLLGMLFTVSHLVLSEEVLPAEKEVTFSHVYRIDSGCKQGSQVGELSQ
DQASEGQLVTVDGENDIVFKHNIRLQSAGCGCADSEDFKALLYRVNGLEEEVTYLKSQCA
QGCCRGGSGVDTSCSGHGTYQHDSCSCKCNPGWEGPDCSVSSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSVATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYYPKGDEGAIKEVQ
VENTKNSYLITGLRPGVTYIVQVYAVIRGINSESDEIVATTEVSGIEGIKVLGQTEDSIQ
VDWKNPAIAVDFFKLTHASPDGQGGEENVAMSQEARTKHTIVGLNPGTEYQIGVQAIKGE
IEGKPSYATGVTDIDAPNNLATREVTENSATVTWDSVRAEIDGYMLTYSSAEGTSREIKV
GAGATSYQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSASV
TWDKVQADIDGYMLSYSSVDGFGQEVRVGADSTSYMFTGLKPGVVYTVYVWAIKGPRSSK
KSSTETETEIDAPQNLKAIDVQTETSTITWKAPQANIDGYILTYRAEDGSMQTVEKTLTA
RENRFALSGLAMGKKYIVTLIAYRGSKRSRVVETTFTTVGMAYPFPMDCTQIMKNGNMES
GIYTIYINNNRSRAMQVFCDMTTDGGGWIVFQRRNSGKLDFMKRWRDYIKGFGELKDEFW
LGLEKIYELTNTPTQYEVRFDLGLGSERTYAVYDNFKIAPSKQKFKLTIGNYKGNAGDAM
TYHQGGSFSTVDSDNDIALGNCALTHQGAWWYKNCHLANLNGRFGDNRHSMGVNWEPWKG
HLQSLDFAEIKIRPVGTAGRQKRSLKRRVAVY
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagattcagccggctgaagagaggtctctttcttctggggatgctctttaca
gtgtcccatcttgtgctgtctgaggaggtgcttcctgcagagaaagaagtcacattcagc
catgtctacaggattgactctggttgtaagcagggttctcaggtgggagagctgtcccag
gaccaggcctcagaaggacagttagtcacagtggatggagagaatgacattgtcttcaaa
cacaacatacgtctacagtcggctggttgtggatgtgcagattcggaggatttcaaagct
ctgttgtaccgtgtaaatggcctggaggaggaggtcacctacctaaagagccagtgtgct
cagggttgctgcagaggagggtcaggcgtggacaccagctgcagtgggcatggcacatac
cagcatgactcttgcagttgtaagtgtaacccaggctgggaaggtccagactgctccgtc
tcatcctgccctgatgaatgcaatgataacggccgttgtgttgacggacgctgcgtttgc
tatgaaggttacaccggccatgactgcagccagctcacatgccccaatgactgcaaagat
aaaggccactgtgtggatggcaaatgtgtgtgctttagtggattctcaggcgaagactgc
agtgttgcaacctgtccgaatgactgcataggtaacggacgctgcgttgatggacagtgc
atctgcgatgagggattcttcggaatcgactgctccatggttctaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtatctctgctggtggagtgggagtctgtaagaggagct
gagtactacatcctgtcctactatccaaagggagacgagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctaatcacaggcctcagacccggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaacagtgaatctgatgaaatagtggctaca
accgaggtctctggtattgaaggaataaaggtgctgggccagacagaggactccatccag
gtggactggaagaaccccgcaatcgctgtggatttcttcaaattgacccatgctagccct
gatggtcagggaggagaggagaatgtggcaatgagccaggaggccagaaccaagcacacc
attgtaggcctcaacccaggaacagaatatcagataggtgtacaagcgatcaaaggtgaa
attgaaggcaagccatcgtacgccacaggggtcacagacattgatgccccgaacaatctg
gcaaccagggaggtgacagagaactctgcaactgtgacatgggatagtgttcgtgctgag
atcgatggctacatgcttacttacagctctgcagagggcaccagccgagaaattaaagtg
ggagcaggcgctacgtcttaccagctgacatctctgaagccaggagtcctgtacacagtt
ttcctctgggcctataagggctctcgttccagtaggaagagcatgactgaggctgagacg
gacatagatgctcctactaacctcatgaccagggaggtgacagaggactcggcgtcggtg
acgtgggacaaggtgcaggctgacattgatggctacatgctgagctacagctctgtagat
ggcttcggtcaggaggttcgagtaggagctgacagcacctcctacatgttcactggtctg
aagcctggtgttgtctacacagtctatgtgtgggccatcaagggcccacgctctagcaaa
aagagctcaacagaaacagaaacagagattgatgcaccccagaatctcaaagccattgat
gttcagactgaaacctccactattacatggaaggctccacaggctaatattgatggctac
atcctgacctacagggctgaggatggcagcatgcagaccgtggaaaaaacattgactgct
cgggaaaatagatttgctctttctggccttgcaatggggaagaagtacattgttaccctt
attgcctacaggggctcgaagaggagtagggtagtggagacaacattcactacagtgggg
atggcctacccgttcccaatggactgcactcagattatgaagaatgggaacatggagagt
ggcatctacacaatctacatcaataacaaccgtagcagagccatgcaggtgttctgtgac
atgacaactgatggtggcggctggattgtgttccagagacgaaacagcggcaaattagat
ttcatgaagcgctggagagactatataaaaggctttggagaactgaaagatgaattttgg
ctcggcttggaaaagatctacgagctgactaatactcctacacagtatgaggtgcgtttc
gatttgggcttgggatcagagcggacatatgccgtctacgataacttcaaaatagcacca
tccaaacagaagtttaaacttaccattggcaactacaaaggaaacgctggtgatgccatg
acctaccaccagggagggtctttctccacagttgattcagacaatgacattgcacttggt
aactgtgctctgactcaccaaggtgcctggtggtacaagaactgccacctggccaatctg
aatggcagatttggggataacagacacagtatgggggtaaactgggagccatggaagggg
cacctgcagtctcttgactttgcagaaattaagatccggccagtgggaacagcgggcaga
cagaagaggtcactgaagaggagggtagccgtgtattaa
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