Chanodichthys erythropterus (predatory carp): 137002372
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Entry
137002372 CDS
T10334
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
137002372 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cery03036
]
137002372 (chd8)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137002372 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
HTH_CHD1_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
137002372
NCBI-ProteinID:
XP_067218046
LinkDB
All DBs
Position
16:complement(37251138..37288432)
Genome browser
AA seq
2583 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDSLPEDAFSQGSSDPVEEALKLALGQVDPPTDATPDPGVPVLS
DVVTDPALMPTPVAAPVSVPLQTLPAQQATQMSHEVSVNPAQISVQPSLSVASNSSGAAT
VLLSSPLGVPVSAAQVATQQLQTQQIAAVTQQAAGQSAPKIVILKGPQGQTQVLQGVTGA
TGSPGKVTLARVLTGTPLRPGMAVVSGGTVLNATSPGQGQVKVGTGVQRLVQTSNGPMKQ
VLLTSMPQTQSQVQIPAQTQLQSPSQPAQVQAQVQPQTQMALQTPVQTQAQAQTVTSSGT
TAAAVRPQGVTLSAVPQQLSFFCFQNPNSPSFSIQGGEAKRITLVLQQPSQGGAGQAGTV
TIGGTSAAGAGQQGQQHRLVLGSLPGKLVLQGGQLAALAQAKAGQTGAQPKVLTIQLQVQ
QQPNQQGAKFQLVSGAANVGGSPQVVQISQGQGGQRLAVPLKLLLQPQSNTVSSAGGAVS
VVKVINTSAAGSASSTTTTAASSGVRLAKAQEPVRRVETLCKQEKANRIVAEAIARAKAR
GERNIPRVLNQDELPAGQTSADLEGIAGAAGAKKKGGGGGGGSGGSKKKSPSLGGGKLVV
GGDKKSKAKTPGLVAGGGGSKSKSKIKLNTITPVGGKKRKRNPSSDHSDVDLSPPVSPRT
LEEEMSQKRRSNRQVKRKKYTEDLDIKITDDEDEMDADVDVTTTPVSAAGHVQSMGAELQ
QELDGDGLPSMQFFVENPSEEDAAIVDKILSMRVTKKEVSPGQYTNVEEFFVKYKNYSYM
HCEWASLEQLERDKRIHQKLKRFKTKQAQMRNIFQEDEEPFNPDYVEVDRILDESHSVDK
DNGEPVVYYLVKWCSLPYEDATWELKEDVDEGKVEEFRKIESRQPRLKRTPRPAASAWKK
LDESREYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVFATGV
QGPFLIIAPLSTITNWEREFSTWTDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAY
KFEALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGT
PLQNTVEELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVE
KNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATHNSNVPNLLNTMMELRKCCNH
PYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQ
MVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN
LTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGL
DRAVLQSMSGNKDSSVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQR
RATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKADIDMDTLNRKNTLVI
DTPRVRKQTRQYSSLRGEGGDLSDLDSDDDYPPHNSRQSRASRRSDRHSGGGYGRTDCFR
VEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLIHYRGDENIKSFIWELI
TPPENGREPQALLNHSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYR
KHLKHQCNKVLLRVRMLYYLKQEVIGEHADSVLRGADARDIDIWLPEMEQQDVPSGWWDA
EADRCLLIGVYKHGYEMYTTMRADPCLCFVERCGRPNEQDINAEQQAADPELGEGGDYDK
YSEDPEFKPATRHTKEVYEEADSVNADGEICVEDRSAPVQVEGPSSGSSDLCYWPTSSSL
TARLRRLITAYQRSYRREQLKMEAAEKGDRRRRRCEQATKLKEIARQERQQRWTRREECD
FYRVVSTFGVERIKKEVEAQEGDEHHMDWNRFRSFARLDKKTDESLTRYFKCFMSMCRRV
CHLRPARGEESQDMSQSLAPITEERASRTLYRVSLLCRLRERVLPHPSLEERLSLAPPSS
DLPNWWSIPQHDHELLLAAARHGVSRTELSIFADPQYSFSQARLDYLQNQQAQAASQIHA
LSQSQDSTGIKEESLDDESRLLGVETLCPSDSPAMLLSHSEGKVGVQVGWGWKKSKNNGP
GERKGGGERGEGPSDSDSDSDSGSSSSSRHSGSSDDSGDSDAEREQAAALKMCDGDEDNS
ILSFTPSQEGTQPESLTDPLRVDWPKDRVLINRIDNLCSLVIMGHWPSGRRYVSDIQFSA
LSEERDLSDDLGYPRVARKSNSALSADVLEGQESEFTVKLLKEEGLKLTFSKQALMPNGE
GSARKKRRDHDELVDAEGVLHAPRRRDLPNWLKENPDYEVEGDMLELLVNRTKRKRRRKR
VEKGAALTGSERIKVIDMRTGKKFGGIYGPALQDLREHLEENPDHAVAPEWSETVRNSGF
LPESLFHRLLSPHASIPKKNRHYLSTPSIPMDDPLLGGGEGETLVSDGAYMMDDEELEDG
GHLTSSHHFLTPAYDVKMEPSALDMDGGDSLSQGGYDSSDREAILDDVIMAPKNSDSSSS
SED
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaattatggacctgtttgatgacacaccactgttcaatttggactccctg
ccggaggatgcgttctcccagggctcctcagacccagtcgaggaggcgctgaagttggca
ctgggccaagtggacccacctacggacgccacgccggatcctggtgtccctgtgctcagt
gacgttgtcacagatccagctctaatgccaacacctgtcgcagctcctgtctccgtccca
ctgcagactcttccagcacagcaggccacccagatgtcgcatgaagtctccgttaacccg
gctcagatttccgttcagccctctctctcggtggccagtaacagcagcggggcggcaacg
gtccttctgagctcccctcttggagtacctgtgtcagcggctcaagtcgccacccagcag
ctgcagactcagcaaatcgctgctgttacgcaacaggcggcagggcagtcggctccaaaa
attgtaattttgaaaggccctcagggtcagactcaagtgctgcagggtgtcacaggagcc
acaggctctccaggcaaagtcaccctcgctagagttctgacagggacccctcttaggcca
gggatggcggttgtttccggggggacggtattaaatgcgacatcacctgggcaggggcag
gtcaaagtgggcactggagtccaaaggctagttcaaacttcaaatggcccgatgaagcag
gtgttactgacctcgatgccccagacccaatctcaagtgcagatacctgcgcagacgcag
ctgcagtcaccatcacagccggcacaggttcaagcgcaggtgcagcctcagacgcagatg
gcattacaaaccccagtacaaacacaggcccaagcgcagactgttacatcctctggaacg
acagcagcggccgtccgacctcaaggtgtaaccctttcagcagtgccacagcagctgtct
tttttttgctttcagaatcctaatagcccctctttctctattcaggggggggaagcaaag
aggatcactctggtgctacagcagccctcgcaaggtggagctggccaggctgggacggtg
acgatagggggaacctcagctgcaggggcgggtcagcaaggccagcagcacaggctggtg
ttgggctctctgccagggaagttggtcctgcagggtggccagctggcagctctcgcccaa
gctaaggcgggtcaaacgggtgcacagccgaaagtgctcaccattcagctgcaagttcaa
caacaacccaaccaacagggagccaagtttcagttggtttctggggcagctaatgttggt
ggcagccctcaggtggtgcagatttctcaaggccaaggaggacaaagactagcagtgcct
cttaaactactgctgcagccacagtcaaacacggtatccagtgctggtggagccgtttct
gtggttaaagttatcaatacctcggctgctggctctgcgtccagcaccaccactacagct
gcgtcttccggtgtgcgtttggcaaaggcccaggagcccgtgcggagagtagaaaccctg
tgcaagcaggagaaagcaaatcgcattgttgctgaggccatcgcacgagccaaagccagg
ggcgaaaggaacatcccccgtgtgctcaaccaggacgagctgcctgccggacagacctca
gcagacctagagggcattgcaggggctgctggagcaaaaaagaaaggagggggtggtggt
ggtggtagtggagggagcaagaagaaaagcccaagtttgggaggagggaaattggtggtg
ggaggagacaagaaatccaaggcgaagactccaggactggttgctggaggtggaggcagt
aaaagtaaatccaagattaagctcaacaccatcactccagtgggtggtaagaaaaggaaa
cgaaatccatcctctgaccactcagatgtagatctaagccctcctgtttcgccccgcaca
ctggaggaggaaatgtcacagaagcgacgttctaaccgtcaggtgaagcggaagaagtac
acagaggatttggacattaaaatcacggatgatgaagatgaaatggacgcggacgttgat
gtgaccacaactcctgtgtccgctgcagggcatgtccagtccatgggagcagaactccag
caggagctggatggggatggtcttccaagcatgcagttttttgtggagaacccaagtgag
gaggatgctgctattgtcgataaaatattgtctatgcgggtgaccaaaaaggaggtgtct
ccagggcagtatactaatgtggaggaattctttgtcaaatacaaaaattactcgtacatg
cactgtgaatgggccagtcttgagcagctggagagggacaagaggatccatcagaagctg
aaaagattcaagacaaaacaggcacaaatgaggaacatattccaagaggacgaggaacct
ttcaatccagactatgtggaggttgatcgaattttggatgagtcacatagtgttgataaa
gacaatggggagccggttgtgtactacctggtgaagtggtgctccctgccctatgaagat
gctacttgggagctgaaggaggatgttgatgaaggcaaagtggaagaattcaggaagatt
gaaagtcgccagcccagactcaagagaactcctcgacctgctgcaagtgcctggaagaag
cttgatgagtccagagagtataagaatggaaaccagctccgagagtaccagctggaggga
gttaactggctgctctttaactggtacaacaggcaaaactgcatcctggcagatgagatg
ggtctggggaagaccattcagtccatagccctgctgtcagaggtgtttgctacgggggtc
caggggccgttcctcatcattgcccctctgtccactatcacaaactgggaaagagagttt
tccacttggactgatatgaatgctatagtttatcacggcagtctggccagtagacagatg
atccagcagtatgaaatgtattgcaaagatgacaagggacacttgataccaggggcctat
aagtttgaagctctgatcacaacctttgagatgatcttatcagactgcccagagctgaga
gagatttcttggcgctgtgtagtaattgatgaagctcaccgtttgaagaacagaaactgc
aaactcctcgacagcctcaagatgctcgaccttgagcataaagtgttgttgacaggcact
ccacttcaaaacacagtagaggagctgttcagtctgctgcactttctggaaccagcccag
ttcccctcggagatagagtttttgcgggagtttggagatcttaaaacagaggagcaggtc
cagaaactacagtcaattctgaagcccatgatgctgcgtagactgaaggaagatgtagaa
aagaacctcgccccaaaacaagaaaccattattgaggtggagttgactgatgtacagaag
aagtattaccgtgctattttagagcgcaactttagcttccttagcatgggagccacacac
aacagcaatgtacccaatctcctcaatacaatgatggaacttcgaaagtgctgcaaccac
ccttacctcattacaggtgctgaggagaagatagtgtctgagctgcgggaggtgtacgat
cctctggctccagactttcatctccaagctctggtgcgctctgcagggaaactggtcttg
ctggataagctgcttcctcgcctcaaggctggcggacacaaagtactcatcttctcccag
atggtgcggtgcctcgacatccttgaggactacctcatacacaagagatacctgtatgag
cgcattgacgggcgggtcagaggaaacctgcgacaggcagccatcgatcggttcagtaaa
cctgattcagaccggtttgtcttcctgctttgtacgcgggctggaggattgggcattaat
ttgactgctgctgacacctgtgtcattttcgactctgactggaacccacagaatgatctt
caagctcaggcacgttgtcaccgcattggtcagtctaaagcggtaaaggtgtatcgtctc
attaccagaaactcctatgagagggagatgttggacaaagcaagtctcaaactggggctt
gatcgagccgttttgcaaagcatgagtggaaacaaggacagcagcgttaatgggatccag
cagttctccaagaaggagatagaggatttgcttcgtaaaggtgcttatgccgccataatg
gatgagaatgacgagggcagccgtttctgtgaggaggacatcgatcagattcttcagaga
agagcaactaccatcactatagagagtgaaggcaaaggatccaccttctccaaggccagc
ttcgtggcgtctgagaatcgcacagatattgctctggacgatcccgagttctggcagaag
tgggccaagaaagcagacatagacatggatactctcaacaggaagaacactctcgtgatc
gacacaccgagagtgagaaagcaaacgcgtcagtattccagcctgcgtggagagggtggt
gatctgtctgacttggacagcgatgacgactacccaccccataattcccgtcaatctcgg
gcctctcgacgctcagaccggcattctggtggaggttacgggcgcacagactgcttcaga
gtcgagaaacacctacttgtttatggatggggccgctggcgggatatcctgtctcatgct
cgctgtaaacgccgtctcagtgaacgtgatgtggaaaccatttgccgtgtcatcctggtt
ttctgtctgatacattaccgtggagatgagaacatcaagagcttcatctgggaactaatc
acccctccagagaatggacgagaaccgcaggctctgcttaatcattctggtctgtccatc
cctgtccctcgtggcaggaaggggaaacgagtgaaggctcagagctcttttgatgtgcag
aaagttgagtggatccgcaagtacaatcctgatagtctactgcttgatgacagttaccga
aaacacctcaaacaccagtgcaacaaagtgttgctgagagtacgtatgctgtattacctg
aagcaggaggtcattggagaacatgctgattctgtattaagaggagctgatgcaagggac
attgatatctggttgcctgaaatggagcagcaagatgttccgtctggctggtgggacgca
gaagctgacagatgtttgcttattggagtctataagcatggatatgaaatgtacaccacc
atgcgtgctgacccctgcttgtgttttgttgagcgatgtggccgtccaaatgagcaggac
attaatgcggagcagcaagcggcagacccggagctcggcgagggaggagactatgacaag
tactctgaagatccagaatttaaacctgcaacaagacacactaaggaggtatatgaggag
gctgattcggtgaatgcagatggtgagatttgtgtggaggatcgctctgctcctgtgcag
gtcgaggggccatcttctggatcatcagatttgtgttattggccgacgagctcatcgctt
acagccagactaaggcgtcttatcacagcctaccaacgcagttacaggcgagagcagctt
aagatggaggcggcagagaagggcgaccgtagacgaagacgctgtgaacaagccactaaa
ctcaaagagatagcccgacaagaacgacaacaaaggtggactcgtagggaggagtgtgat
ttttacagggtggtatcaacctttggtgtcgaaaggataaagaaagaggtagaggctcaa
gaaggggatgagcatcatatggactggaatcgttttcgctcgtttgctcgacttgataag
aaaacggatgaaagcttgacgcgttacttcaagtgcttcatgtccatgtgtcggagagtg
tgtcaccttcggcctgcacgtggagaagaatctcaagatatgtcccaatccctggccccc
atcacagaagaacgagcctcgcgcacactctacagggtcagcttgctgtgtcggctacgt
gagcgtgttcttccccacccgtcgttagaggagcgcctcagtctggcgccacccagctcc
gacctgcccaactggtggagcatcccacagcacgaccacgagctgctcttagctgccgct
agacatggcgtcagccgcactgaactctcgatcttcgctgacccacagtactcattcagt
caggcccgtctcgactacctccagaatcagcaagctcaggcagcttcacagattcacgcg
ttaagtcagtcacaggattcgaccggtatcaaagaggagagcctagatgacgagtctcgg
ctgttgggggtggagaccctctgtccgtcagactccccagccatgctcctctcccattct
gaggggaaagttggagttcaggttggatggggctggaagaagagcaaaaacaatgggccg
ggtgagagaaaaggaggaggagagagaggtgaagggccttcggactcagattccgattca
gactcgggctcgtcttcctcctcccgtcattcgggcagctcggatgatagcggagacagt
gatgcagagagagaacaagcagcagctcttaagatgtgtgatggggatgaagataacagc
atcctgtcattcacaccatctcaagaaggcacccaacctgagtccctcactgaccctcta
agagttgactggcccaaagaccgtgtgttgataaaccgaatagacaacctctgttcgctg
gttattatggggcactggccgtcaggtcgccgctacgtctctgatattcagttcagtgct
ttgtctgaagagcgtgacctcagcgatgacctgggttaccccagagtggcacgcaaaagc
aacagtgccctatctgcagacgttcttgaaggccaagaatcagagttcactgtaaaactc
ctgaaggaggaggggctgaagctaacgttctctaaacaggctctgatgccaaacggtgaa
gggagtgcacgcaaaaagcgaagggaccatgatgagctggtagatgccgaaggggttctt
catgctccccgcaggagggaccttcccaactggctcaaagaaaacccagattatgaagta
gagggagacatgctagagttactggtgaaccggaccaaaaggaagaggaggaggaagagg
gttgagaaaggagcagcacttacgggcagtgagagaataaaggtcatagacatgaggacg
ggcaagaagtttggtggaatatacgggcctgcactacaggacctgagagagcacctggag
gagaatccagaccacgctgtagcaccggagtggtccgagactgttcgcaattcgggcttc
ctgcctgagagtttattccacagactgttgagtccccacgcttcaatccccaaaaagaat
cgacattacctctccacaccttcgatcccgatggatgaccctctcctcggaggcggcgaa
ggcgagacgttagtttccgatggcgcgtacatgatggacgacgaggagctggaagacggc
ggtcacctcacgtcatctcaccacttccttactccagcctacgatgtgaagatggagcca
agcgctctcgatatggacggaggtgacagtttgtcacaaggtggatatgatagctcagac
agagaggccattttggatgatgtcataatggcaccgaaaaattcagactcttcctcgagc
tccgaggattga
DBGET
integrated database retrieval system
