Chanodichthys erythropterus (predatory carp): 137002410
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Entry
137002410 CDS
T10334
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137002410 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
137002410 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137002410 (thoc1)
03041 Spliceosome [BR:
cery03041
]
137002410 (thoc1)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137002410 (thoc1)
Spliceosome [BR:
cery03041
]
Complex C
Other components
EJC/TREX
137002410 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137002410 (thoc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
137002410
NCBI-ProteinID:
XP_067218128
LinkDB
All DBs
Position
16
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AA seq
655 aa
AA seq
DB search
MSPPSHFDFIEARDKFTAAAKSAVDLRNCKPLTNAFSHLPGNETEKKATLDQALRGVLEE
QIVKQKVNVEDFLSLIYISIDGVTEGICSASTPFLLLGDVLDCLPLDQCDKIFTFVEENV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQDSTLGLQHTEVKEDGMEVEEGEMGDEDAPAPCSIPIDYNLYRKFWT
LQDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSYKLDDMQASKRKLKEMRTAAGDHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSSWIEDTAKL
VYQLLRETPPDGDKFASMVEHILNTEENWNSWKNEGCPSFVKERPAETKPMRPSRKRQAP
EDFLGKGPDRKILMGNEELTRLWNLNPDNMEACKSDSREFMPSLEEFFEEAIEQADPANM
VEDEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPS
EEIKTGEEDDDENGDNLLKDSNDSPSIQSKGVTNSQMDEIAAKLGSQWKSLADHLEMSEK
EIRVIEADSEDVELQAKMLLVAWQDREGPQATMESLVTALTTAGFRNIADGLNET
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgtctcacttcgacttcattgaagctagagataaatttacggctgcagct
aaaagtgctgttgatctcaggaactgtaaaccactgaccaacgccttcagtcatctgcct
ggaaatgaaactgagaagaaggccactcttgatcaagccctgcgtggagttcttgaagag
caaatagtgaagcagaaagtgaatgttgaagatttcctttctctgatctacatcagtatt
gatggagtgactgaaggcatttgctctgcttccactccttttcttctgctgggagacgtt
ctcgactgtcttcctctggatcagtgtgacaaaatcttcacctttgttgaagaaaatgtc
tctacatggaagtctaatacgttttactctgctggaaaaaattacttgttacgaatgtgc
aatgacctccttagaagactctccaagtctcagaatacagtgttttgtggaagaatccaa
ctgtttttagcacgtctcttccctttgtctgaaaaatcaggactgaacttacagagtcag
ttcaaccttgataacatcacggtgttcaacaaaaatgagcaggacagcacacttgggctg
cagcacacagaagttaaggaggatgggatggaggtggaggagggagagatgggtgatgaa
gatgcacctgctccgtgctccattcctattgactacaacttgtacagaaaattctggacc
ctgcaggactatttcagaaaccctgtacaatgctacgacaagttctcgtggatgactttc
cttaagtattcagatgagacactagctgtgtttaagagctataaactggatgacatgcaa
gcatcaaagagaaagctgaaggagatgaggactgctgctggagaccatgtctactttgcc
aagttcctcaccagtgagaaattgatggaccttcagttgagtgacagcaacttcagacga
cacattttgcttcaatatctcatcctcttccagtatctcaagggccaagtcaagttcaag
agctccagctgtgttttgaatgatgatcagtcttcgtggattgaggacacagccaaacta
gtctatcagttactgagagaaacccctccagatggtgacaagtttgcatctatggttgag
cacatcctgaatacagaagaaaactggaactcctggaaaaatgagggctgcccaagcttc
gtgaaagaaagaccagcagagaccaaacccatgcgccccagcagaaagcgacaagcacca
gaggactttttggggaaaggacctgatcgcaaaattctcatgggaaatgaggaactcaca
agactctggaatctaaaccctgacaacatggaggcctgcaagtcagatagcagggaattc
atgccatcactggaggagttttttgaagaagctattgaacaggcagatccagcaaacatg
gtggaggatgagtacaaagttgtgcgtaactcaaactacggctggagagccttgcgactg
ctctccaggaggagtcctcacttcttccagccaaccaatcagcagttcaagagtctggca
gactatctggaaaacatggtcatcaaactggccaaagagcttcctaaagaccttccttct
gaggagataaaaactggagaggaagatgatgatgagaatggagataacctgttgaaagac
agcaatgacagtcccagcattcagagcaagggagtgaccaacagtcagatggatgagatt
gcagccaagcttggctcccagtggaagtcgctggcagaccatctggagatgagcgagaag
gagattcgtgtgatagaggctgacagtgaggatgtagaacttcaggcaaagatgctactg
gtggcctggcaggaccgagaaggccctcaagcaacaatggagagcctggtcacggccctg
accacagctggattccgtaacatcgcagatggtctcaatgaaacataa
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