KEGG   Chanodichthys erythropterus (predatory carp): 137002426
Entry
137002426         CDS       T10334                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cery  Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:cery00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cery04121]
    137002426 (hltf)
   03400 DNA repair and recombination proteins [BR:cery03400]
    137002426 (hltf)
Enzymes [BR:cery01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137002426 (hltf)
Ubiquitin system [BR:cery04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    137002426 (hltf)
DNA repair and recombination proteins [BR:cery03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    137002426 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 zf-Nse ResIII Prok-RING_4 zf-rbx1 zf-RING_6 HDA2-3 Zn_ribbon_6 zf-RING_11 zf-Vps39_C
Other DBs
NCBI-GeneID: 137002426
NCBI-ProteinID: XP_067218150
LinkDB
Position
16:complement(27501195..27513848)
AA seq 962 aa
MQSSNISPRTAAHPHSPSTSASPRYALIDFMDVGRTETISQEIENLTEDAGQDLEAEESV
QIGSIQGSVVGLRYYTGMVNRGEMVSLVREPRNPYDRNAVMVANVYGSQVGHIKKELAAP
MAYIMDNNLARVEGVVPFGNTNKFTMPVILTFWGKEENREAVNNQMTRYGFRLGTDLKGG
AAHTSSGRNLLGLSSKIAAIPLTVEELKNAFDKLFDDLMEDKTREMEPAEAVCTPLLPHQ
KQALSWMTSRENSNDLPPFWEEKNGLYFNVLTNFAVKERPEKVLGGILADDMGLGKTLTT
IALIVSNFHNGKPLPLEQCEGSSMPSTTRKKAASKEKSGNREVEPVGLSPLKRQHDHIVI
VDSDDEDAPQKKAKNTKKTAKKSANTKKGVVLLDDVDFAAALECTSSQAVPAKKCAKKSS
GTGRGPSGASGGSGARATLIVCPLSVLSNWLDQFEQHIRANVTLKVYLYYGAERSRSVSL
LSGQDVVLTTYNVLSSDFGNKASSPLHQVNWLRVVLDEGHVVRNPSALQSKAVLELQSER
RWILSGTPIQNSLKDLYMLLSFLKLKPFDVKEWWNRIIQRPVTMGDRFGLKNLQALVKGI
TLRRTKNSKVAGRMVVQLPARRVFVQHVTLSEEEREEYEQVKREGRNIVGRYFQEGTVMT
NYADVLAILVRLRQCCCHPSLVGKYTVAGDPGTPGELRERLINKITLVLNSGSDEECAIC
LDSLRQPVITYCAHVYCRPCIREVIRSEKEQARCPLCRAQIKTKELVEYPGEEVEAHSAT
GENWRSSSKVDALMSNLLKLRNEDPTVKSLVVSQFTRFLDLLEVPLREYGFSFTRLDGSM
NQKIRAKAIQDFQDSSSRSPTIMLLSLKAGGVGINLTAASHVFMMDPAWNPAAEDQCVDR
CHRLGQNRDVVITKFIVKDSVEENMVKIQKKKQELVEKAFGVKNSQDLKRARIDEIRTLM
EI
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgcagtcatcaaacatcagtccccgcactgctgctcaccctcacagcccctcgaccagc
gcctcgccacgatacgctcttatagacttcatggatgttggccgcacagagaccatatcc
caagaaattgaaaatctaacagaagatgcagggcaggacctggaggcagaggagagtgtt
cagattggatcaattcaaggctcagtggttggtctgcgctactacactggaatggtcaat
agaggagagatggtgtctttggtgagagagccgcgcaatccctatgaccgaaatgcagtg
atggttgccaatgtgtatggcagtcaggtggggcacatcaagaaagagctggcagcccca
atggcatacattatggacaacaacttggccagggtggaaggggttgtgccctttgggaat
actaataaattcacaatgcctgtgatcctcacattctggggcaaagaggagaaccgagaa
gctgtgaataatcagatgacacgctatggtttcagacttggcactgacctcaaaggaggt
gctgcacatacatcttccggtagaaatctgcttggattgtcctcaaaaatagctgccatt
cctttgactgtagaagagctaaaaaatgcctttgacaagctctttgatgatttgatggag
gataaaaccagagaaatggagccagcagaggcagtgtgcactcctcttctcccacatcaa
aagcaggcgctctcatggatgacctctcgtgaaaacagcaacgatctgcccccgttctgg
gaggagaagaatggcctttactttaacgttctcacaaactttgcagtgaaggaaaggcca
gagaaagtgcttggtgggattttggctgatgacatggggctgggcaaaaccctcaccacc
attgccttaattgtctctaatttccacaatgggaaacctctgccactggaacaatgtgaa
ggatcttccatgccttctactaccagaaagaaagcagcctcaaaagagaaaagtggaaac
cgtgaagtggaacctgtggggttgtccccattgaaaagacagcatgatcatattgtcatt
gttgactccgatgatgaagatgcacctcagaagaaagcaaaaaacacaaagaaaactgct
aaaaagtctgctaacaccaagaaaggagtggttctgctggacgatgtagacttcgctgcc
gctctggagtgcacttcctcacaggctgtgcctgcaaaaaagtgtgcaaagaagagttct
ggcactggtagaggcccatctggagccagtgggggctcaggggccagagccactttgatt
gtatgtcctctgtctgtccttagtaactggctggaccagtttgagcaacatatccgagca
aatgtcacattgaaagtgtacctgtactacggcgctgagcgcagccgatctgtcagcctt
ctttctgggcaagatgtagttctcacaacatacaatgtgctttcatcagattttggaaat
aaagccagcagtcctctgcaccaagtgaactggctgagggtggtgctggatgagggtcac
gtcgtcagaaatcctagtgcacttcagagcaaagctgtactggagctccagtcagagcgc
aggtggatcctgtctggaactcccattcagaactccctgaaggatctgtacatgctgctg
tcctttttgaagctgaagccttttgatgtgaaggagtggtggaacagaataattcagaga
cctgtgaccatgggcgacagatttggactaaagaacttgcaagcgctggtaaaggggatc
acactgaggcgcactaagaacagtaaagtggccgggcgcatggtggtgcagttacccgca
aggagagtgtttgtgcagcatgtgactctctctgaggaagagagggaggagtatgaacag
gtcaagcgggagggcagaaacatcgtcggcaggtatttccaagagggaacggtcatgaca
aactatgccgacgtgctggccatcctggtccgtctgaggcagtgctgctgtcaccccagt
cttgtgggcaaatacacagttgcaggtgatcctgggacccccggcgagctgcgggagcgt
ctcatcaataagatcacattggtgctgaactctggctcagacgaagagtgtgccatctgt
ttagactccctacgtcagcctgtcatcacctactgcgctcatgtgtattgcaggccctgc
atccgtgaggtcattcgctcagagaaggagcaggccaggtgtcccctgtgtcgtgctcag
atcaagactaaagaactggtggagtatcctggagaagaagtggaggctcattcagcaact
ggggagaattggcgatcaagttccaaagtggatgctttgatgagcaacctgttgaaactt
cgcaatgaagaccccactgtgaagagtcttgtggtctctcagtttaccaggtttctggat
cttttagaggttcccttgagggaatatggattctctttcactcggctggatggctctatg
aatcagaagatccgagcaaaggccattcaggactttcaagactcctcttcaagaagccct
accataatgttactgtcactcaaagctggaggggttgggattaatctaaccgctgcttcc
catgtctttatgatggatccagcctggaatcctgcagcagaagatcagtgtgttgacaga
tgtcatagattgggccagaatagagatgtggtgatcactaagtttattgtgaaagactct
gtggaggagaacatggtgaagattcaaaagaagaagcaggaacttgtggagaaagctttc
ggagtgaaaaactcacaggacctaaaacgggcacggatagatgagatccgaaccctcatg
gagatttag

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