Chanodichthys erythropterus (predatory carp): 137002528
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Entry
137002528 CDS
T10334
Symbol
smg7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137002528 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137002528 (smg7)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137002528 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
137002528 (smg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
137002528
NCBI-ProteinID:
XP_067218340
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All DBs
Position
16
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AA seq
1172 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLCKSLDKLNTLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDFSNEADEHSYSSDEQISWIQLLGLFMSFLGVMLSRALLNKNREEIMGECPL
PAIKVSLDWLRLRPNVFNESAMDKRQYIWPWLVSILNSFQPKEEDVSHVSVIPLPEEFEL
QGFLALRPALRMLDFSKGHQSVVVGKESLLVHSRHQRLISLGKWVADNQPRLIQCRISDG
LLLFITDIPEMVVEEPQEKDTPVLQESSNGEQTPNDSTQGLKSVLSAGKNQNSGLDGSER
PVVTFKENIKPREQSREQNRNQNQRDAGKDRAAFNKGNGIQGKSEQKKEGKRKSEVKKNS
HDKTIDAGKQVKTQTEMRKTPVSEARKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRPGFP
PPAYVIPPPVAFSMSPGFTFPTGVSVPAPFLQTASHPQSANSVQTGKPSHIPYSQQRPSG
PGALNQGPPQPQQTQPPPPQPSQQALQQSVQLQVQQQQQQQQSPTKQSSQLGKSPPHHHS
MQQSYMQVPEQPGQMWSQHQTQPTMQKMPMQMPVKQPFFMPTQDPMKLFEHPMSMQPPQP
SMDKKMKFPEVKVQDFYWEPPYHMVGEGRSGMGDRMGKRQPGVFCPDQENMPRGPPYEDN
KSSPLLPPDLLKTLADFEEEEELLFTKPHDFYQALAGPLNSAPGRNMFLPNPSRLDSGAD
VIGQSSLLPRFSIQESSYQNNSIFSEAYGKNMAPASKSDAPMMHQEPSLYSLFEGTPWSP
SLPASSDHSTPASQSPHSSNPSSLPSSPPTHSHGSLPFSNFGPIGTPDSRDRRGNDRWKA
DKTGVSGFGLDYLPSASSSSVSENNSWHQGAPTSSWAAQDMPMEDSSTVLLDSFKSIWSS
SMMQPGPSALEQLLMQQKQKQQRGHGNMNPPH
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatacttacggcaggcagaggccctgaaggctgacatgacagat
tctaagcttggtgctgcggaggtctggacatcacggcaggctcttcaggacttgtaccag
aaaatgctggtgacggacctggagtacgccctggacaagaaagtggaacaagatctctgg
aaccatgctttcaagaatcaaataacaacactacagagtcaggctaagaacagggccaac
cccaatcgaagtgaagtacaggccaatctctccctcttcctggaggcagctagtggattc
tatacgcaattgttgcaggagctgtgcacggtgtttaatgtggacttgccatgccgtgtg
aaatcatctcagcttggcatcatcagcaataaacagagcagcaccagcgctattgtgaaa
ccccagcccagctcctgttcctacatctgccagcactgtctcgtccatctcggagatatt
gcacgttatcggaaccaaaccagccaggctgagtcgtactacagacatgcagctcaactt
gttccctcaaatggtcaaccttacaatcagctggccatattagcctcctccaaaggagac
caccttacaacaatcttctactactgcaggagcattgctgtcaaattcccatttcctgct
gcctccaccaacctacagaaagctctttccaaggcccttgaaagccgtgatgaggtcaaa
acgaaatggagcgtgtctgatttcattaaggcctttatcaagttccacggccatgtttat
ctctgcaaaagcctagataaactgaacaccctgagagagaaactagaggagcagttccag
aggctgattcttcagaaagccttcagctcccagcagctggtccacatcacggtaataaac
ctgtttgaactgcaccacctcagagatttcagcaatgaggcggatgagcacagctacagc
tcggacgagcagatcagctggatccaactccttggcctcttcatgtctttcttgggcgtg
atgcttagccgagctttactcaataagaaccgagaggagatcatgggggagtgccctctt
cctgccatcaaagtgtctcttgactggctgaggcttcgacccaatgtgtttaatgaaagt
gccatggacaagcgacagtacatctggccatggctggtgtccattctgaacagctttcag
cctaaggaggaggatgtgtctcatgtgtcagtgattccactgcctgaggagtttgagctg
caaggctttctggcccttcgccctgctttgcggatgctagacttctccaaagggcatcag
agtgtcgtggttggcaaagagagcctgttagttcattcccgacaccagagactcatcagc
ctgggcaagtgggtggctgacaaccaaccacggttgatccagtgtcgcataagtgatggc
cttctgctcttcatcactgatatccctgagatggttgtggaagagccacaggaaaaagac
acgcctgttctccaggagtcatctaatggtgagcagacccccaatgacagcacccagggc
ctgaagtcggtcctctccgccggaaagaaccagaacagtgggctggatggcagcgagaga
cctgtggtcaccttcaaggagaacattaaacctcgagagcagagtagagaacagaaccgg
aaccagaaccagagggatgcagggaaggacagagctgcatttaataaaggaaatggaata
caagggaagagtgagcagaagaaagagggcaagagaaagagtgaggtgaagaaaaacagt
catgataaaacaatagatgctgggaaacaggtgaagacacagactgagatgaggaagact
ccagtgtctgaggcaaggaagactccagtcacccagacacaaaccacatgctcttcacag
tttatccccatccaccaccctggagctttcccaccattgcccagcagaccaggcttccct
ccaccagcatatgtgatccctcctcccgtggcattctccatgagcccgggcttcaccttc
cccacaggtgtatccgtacccgcacccttcctccagactgcctcccaccctcaatctgcc
aattcggtgcagacagggaaaccctcacacattccctacagccagcagaggccctcgggc
cctggagctctaaaccaaggccctccccagcctcagcagacacagccgccccctccacaa
ccatcccaacaagccttgcaacaatctgtgcagctccaagtacagcagcaacaacaacag
cagcagtcgcccaccaaacagagttctcagctcggcaaaagtccaccacatcatcacagc
atgcagcagtcatacatgcaggtgcctgaacagcctggtcaaatgtggagccagcaccaa
acacagcccaccatgcagaaaatgcccatgcagatgccagtcaaacagcctttcttcatg
cccacccaggatccaatgaagctctttgaacacccaatgagcatgcagccccctcagccc
agcatggacaagaagatgaagtttccagaggtcaaagtgcaggatttctactgggagcca
ccttaccatatggttggagagggcaggagcggaatgggggacaggatgggcaaacgtcag
cctggagttttctgtcccgaccaggagaacatgcccagaggccctccatatgaagacaac
aagagctcccctcttctgcccccagacctgttaaagactctggcggactttgaggaagag
gaggagctgctctttactaaacctcatgatttctaccaggccttggctggtcctcttaat
tctgctccgggaaggaacatgtttttgccaaatccatcgcgactagacagtggagctgat
gtgattggtcagtcctcccttctcccccgattttccattcaggagagctcttaccagaac
aacagtatttttagtgaggcatacggtaaaaatatggcccctgcgtctaagtcggatgca
cccatgatgcaccaggagccctcactctactccctatttgaaggaaccccatggtccccc
tcccttcctgctagctcagatcactcaacaccagccagtcagtccccacactcttccaac
ccaagcagcctgccttcatccccacccacccacagccacggctccctgcccttttccaac
ttcggccccattgggacgcctgacagcagagaccggcgtggaaacgaccgctggaaggca
gataaaactggtgtgagtggctttgggttggactacctgccttctgcctcgtcctcctct
gtgtcagagaacaacagctggcaccagggggcgccaaccagcagctgggcagcccaggac
atgccaatggaggactcctctactgtcctccttgacagtttcaagtcaatctggtcgagc
tctatgatgcagcccggtccgtctgcgctggagcagctcctgatgcagcagaaacagaag
cagcagcgcggccacggcaacatgaacccgccacactga
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