Chanodichthys erythropterus (predatory carp): 137002577
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Entry
137002577 CDS
T10334
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137002577 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137002577 (copb2)
Membrane trafficking [BR:
cery04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
137002577 (copb2)
Exosome [BR:
cery04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
137002577 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
137002577
NCBI-ProteinID:
XP_067218417
LinkDB
All DBs
Position
16:complement(38020338..38034144)
Genome browser
AA seq
943 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQESNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEQFLRETCLGKTRPASDYPLITPNEERNVLEEA
SGYEPKGIIPTPTEQVKASEEPPEDVGVLASVMAAVSAPVVAAMSHAESQPPQKVEEKTE
EEPPTVTAEEQKVIDELEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaaactcacggctcgatctgaccgtgtcaaaagc
gtagaccttcatccgtccgagccatggatgctggccagtctgtacaacggcagtgtgtgt
gtgtggaaccatgaaacacaaactctggttaagacgtttgaagtctgtgacctgccagta
agagccgccaagtttgttgccaggaaaaattgggtcataactggtgctgatgacatgcaa
attcgggttttcaactacaacacattagagcgagtacacatgtttgaggcccattcagat
tacattcgctgcatcgctgtgcatcccacccagccctacatcctcacgagcagcgacgac
atgttgataaagctgtgggactgggagaagaaatggtcctgcagtcaggtgtttgagggc
cacacacactacgtgatgcagattgtcatcaaccccaaggacaacaaccagtttgcgagt
gcatcgctggacagaaccatcaaggtttggcagctgggctcttcctctcctaacttcact
ctggagggtcatgataagggggtgaactgcattgattattacagtggaggagataaaccc
tacctcatatctggagctgatgacagactggtcaagatttgggactatcagaataagaca
tgtgtgcagactctcgagggtcacgctcaaaatgtgtcctgtgtcaacttccacccagag
ctgccaatcatcatcactggatcagaggacggcacggttcgtatctggcactccagcact
taccgtctagagagcaccctgaactatggcatggagcgggtgtggtgtgtgtctggcctg
cgcggctccaacaatgtggcattgggctatgacgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggacaccagcggaaagattatttgggccaagcactca
gaaattcagcaggctaaccttaaagccatgggagatgctgagatcaaggatggcgagagg
ctgccactggcggtgaaggacatgggcagctgtgagatttacccccaaactatccagcac
aatcctaatggcaggtttgtggtggtgtgtggagatggagaatacatcatctacaccgca
atggctctgaggaacaagagctttggatctgcacaggagtttgtctgggcccatgattca
tctgagtacgcgatccgggaaagcagcagtgtggtgaagatcttcaaaaactttaaggag
aaaaaatcttttaagccagactttggagcagagggcatctatggtggtttcttgctgggc
gtcagatcagtgaatggcttggctttctatgactgggataacacagagctgattcgtcgc
attgagatccagcccaaacacattttctggtcagactctggtgagctggtttgcattgcc
acagaggagtctttcttcatcctgcgctatctgtcagagaaggtggctgcatcacaagag
tcaaatgagggggtcactgaagatggtatcgaagatgcttttgaggtcctgggagagatt
caggaagtggtaaagacaggtctgtgggtgggagactgtttcatttacaccagctcagtc
aacagactcaactactttgttggaggagagattgtcaccattgctcacctggacagaacc
atgtaccttctgggatacattcctaaagacgaccgtctttacctgggtgataaggagctg
aacattgtcacgtactctcttctggtgtctgtcctggagtaccagactgctgtcatgcgc
agagactttggcatggctgacaaagtgctgcccaccatccctaaagaacagagaaccagg
gttgcccacttcctagaaaaacagggtttcaagcagcaggccttggccgtgtccaccgat
ccagagcaccggtttgagctcgcgcttcagttaggagagctgaaaatcgcctaccagcta
gcagtagaagctgagtctgagcagaagtggaagcagctggcagagttggccatcagtaag
tgccagtttggtttggcacaggagtgcctccatcatgcccaggactatggaggtcttctg
ctgctggccactgcatctggcaatgcatctatggttgccaagcttgcagagggggcagag
cgtgacggaaaaaacaacgttgccttcatgacctacttcctgcagggaaaactggacaac
tgtttggagctcctgatcaagaccaatcgtctgccagaagcagcctttcttgcccgcaca
tatctgcccagccaagtgtccagggtggtgaagctttggagagagagcttgtctaaagtg
aatcagaaagctgcagagtctctggcagatccgacagagtatgagaacttgttcccaggc
ctgaaagaggcgtttgtggcggagcagttcctgagagagacatgcctcggcaaaaccaga
cctgcctcagactacccactgatcacgcccaatgaagaaaggaacgtgctggaggaggcc
agtggttatgaaccaaaaggaattatccccactcctacagagcaggtgaaggcctcagag
gagcccccagaggatgtgggtgttttggcctccgtgatggcagccgtctcggctccagta
gttgctgccatgagtcatgcagaatcccagcctcctcagaaggtcgaggagaagacagag
gaagagcctcccacagtgacagcagaagaacagaaggttattgatgaactggaggatgat
ttggataacatggagcttgatgacatcgacaccacagacgtcaatctggatgacgacttc
ttagatgactaa
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