Chanodichthys erythropterus (predatory carp): 137002641
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Entry
137002641 CDS
T10334
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03271
Virion - Rotavirus
cery04145
Phagosome
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04514
Cell adhesion molecules
cery04530
Tight junction
cery04810
Regulation of actin cytoskeleton
cery04820
Cytoskeleton in muscle cells
cery05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
137002641
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137002641
04514 Cell adhesion molecules
137002641
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137002641
09144 Cellular community - eukaryotes
04510 Focal adhesion
137002641
04530 Tight junction
137002641
09142 Cell motility
04820 Cytoskeleton in muscle cells
137002641
04810 Regulation of actin cytoskeleton
137002641
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137002641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137002641
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137002641
04515 Cell adhesion molecules [BR:
cery04515
]
137002641
04090 CD molecules [BR:
cery04090
]
137002641
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
137002641
Exosome [BR:
cery04147
]
Exosomal proteins
Proteins found in most exosomes
137002641
Cell adhesion molecules [BR:
cery04515
]
Integrins
Integrin beta subunits
137002641
CD molecules [BR:
cery04090
]
Proteins
137002641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
137002641
NCBI-ProteinID:
XP_067218510
LinkDB
All DBs
Position
16:4373500..4398467
Genome browser
AA seq
799 aa
AA seq
DB search
MDVRLLLISVLLGLSRAQIDVNECTKASAQSCGECIQAGEKCGWCTDEKFLKQGEQKSTR
CDELDALIKKGCSNASIENPRGRVKVDKDQPVTNRTKDGVKLKPDQITQIKPQKLTLDLR
SGEAQTFPLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTHLMKKMQTITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTEDGSQFNNLVSRQQISGN
LDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLQ
DNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYEELKNLIPKSAVGTLSSDS
NNVIDLIIDAYNSLSSEVILENSRLPEGVSISYVSHCKNGVSEKGENGRKCSNISIGDEV
TFEVAITAKGCPSNGKSETIKIKPLGFTEEVEIVLNFICECECHKDGIPNSPVCHFGNGT
LECGACRCNEGRIGRTCECSKDEVRTEDLDANCRVDNSTDICGNNGDCVCGTCECKKRDN
PEERYSGKFCECDNFSCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCLASN
KQICNGRGTCECGQCKCSDPKFQGPTCEICPTCPGVCTEHKDCVQCRAFKTGDKKDTCEK
ECGGLNLKIVKKKEDLPQPNDQPYINHCKERDANDCWFFFTYATKEDGTIEVQVAEDLEC
PSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQENPIY
KSPINKFQNPSYGNKGVTL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaggctgctcttgatttcagttctgcttggactcagcagggcacaaatagat
gttaatgaatgcaccaaggcctcggcccagtcctgtggcgaatgcattcaggccggagaa
aagtgtggctggtgtacagacgagaaatttctgaaacagggtgagcagaaatccacacgc
tgtgacgagcttgatgctctgattaagaagggctgttctaacgccagcatagaaaatcct
cggggaagagttaaagtcgacaaggaccaacctgtaacaaatcgcacaaaggatggagta
aaactgaaaccagaccagatcacccagattaagccacagaaactcaccctagacctcaga
tcaggcgaagctcagacgtttcctctgaaattcaagagagctgaggattatcccatagat
ctctactacctgatggatctcagctactctatgaaagacgatttagagaatgtcaaaaac
ctgggaacccaccttatgaaaaaaatgcaaacaatcacatctgacttcaggattggtttt
ggctcctttgtggagaaaactgtcatgccatacatcagcacgacaccagccaagctgctg
aacccctgtacatcagaccagaactgcaccagcccgttcagctataaaaatgtgctgagt
ctgactgaggatggatctcagttcaataaccttgtcagcaggcagcagatatcaggaaac
ctggactcaccagagggaggtttcgatgccatcatgcaagtggctgtctgcgcgaatcag
atcggctggaggaatgttacccgtctgcttgtgttttccacggatgctggattccacttc
gctggagatggaaaattaggcggcatcgtgcttcctaatgacgggaaatgccatctgcag
gataacatgtacaccatgagccattattatgactatccatccattgcacatcttgttcaa
aaattaagcgaaaacaacattcagaccatttttgcagtaactgaagagttccagcccgtt
tacgaggagctgaaaaacctcattccaaagtcagctgtgggcacattatcctccgactcc
aacaacgtgatagacctcattattgatgcatataattctctgtcctctgaggtcattctg
gagaacagcaggctgcccgaaggtgtgtccatctcctatgtgtcccactgcaagaatgga
gtgagtgaaaaaggagaaaatgggagaaagtgctccaacatctccattggggatgaggtg
acatttgaggtagcgatcacggctaagggttgtccatctaatggcaagtcagagaccata
aagatcaaacctctgggcttcactgaggaggtggagatcgtcctcaacttcatctgcgaa
tgtgagtgtcacaaagacggaatcccaaacagcccagtgtgtcacttcggcaacggtacc
ctggagtgtggagcatgcaggtgcaatgagggacgtatcggcaggacttgtgaatgtagc
aaagacgaggtgagaacagaagatctagacgcaaactgccgcgtggataacagcacagat
atctgcggcaacaatggagactgtgtttgtggaacttgtgagtgcaaaaaaagagacaac
ccagaggagagatacagcggaaagttctgcgagtgcgacaacttcagctgcgaccgctcc
aacaacaagctctgtggaggtcatggtcgttgtgaatgccgaaagtgtatctgtgacgct
aactacaccggcagtgcgtgtgactgctctttggacacctccacctgtctggccagtaac
aaacagatctgtaacggtcggggaacctgcgagtgcggccagtgtaaatgttccgaccca
aagtttcagggtccgacctgtgaaatctgcccaacctgccctggagtttgtactgagcac
aaggattgtgtccaatgccgagcatttaaaactggtgacaagaaagacacatgtgagaaa
gagtgcggtggcttaaatcttaaaatagtgaagaagaaggaggatcttcctcagcccaat
gaccagccctacatcaatcactgcaaagagcgggatgctaacgactgttggttcttcttc
acctacgctaccaaggaagacggcaccattgaggtccaggtggcggaggatcttgagtgt
ccctctggccctgacatcattcccatcgtagcgggtgtggtcgcaggaatcgttttgatt
ggtttagcgcttctgctcatctggaagctgctcatgattattcatgaccgcagagagttc
gccaagttcgagaaggagaaaatgaacgccaagtgggatgcgcaagagaacccgatatac
aagagccccattaataaattccagaatccaagttatggaaataagggcgtcacactctga
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