Chanodichthys erythropterus (predatory carp): 137002642
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Entry
137002642 CDS
T10334
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03271
Virion - Rotavirus
cery04145
Phagosome
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04514
Cell adhesion molecule (CAM) interaction
cery04517
IgSF CAM signaling
cery04518
Integrin signaling
cery04530
Tight junction
cery04810
Regulation of actin cytoskeleton
cery04820
Cytoskeleton in muscle cells
cery05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
137002642
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137002642
04514 Cell adhesion molecule (CAM) interaction
137002642
04517 IgSF CAM signaling
137002642
04518 Integrin signaling
137002642
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137002642
09144 Cellular community - eukaryotes
04510 Focal adhesion
137002642
04530 Tight junction
137002642
09142 Cell motility
04820 Cytoskeleton in muscle cells
137002642
04810 Regulation of actin cytoskeleton
137002642
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137002642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137002642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137002642
04515 Cell adhesion molecules [BR:
cery04515
]
137002642
04090 CD molecules [BR:
cery04090
]
137002642
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
137002642
Exosome [BR:
cery04147
]
Exosomal proteins
Proteins found in most exosomes
137002642
Cell adhesion molecules [BR:
cery04515
]
Integrins
Integrin beta subunits
137002642
CD molecules [BR:
cery04090
]
Proteins
137002642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
137002642
NCBI-ProteinID:
XP_067218512
LinkDB
All DBs
Position
16:4330985..4362362
Genome browser
AA seq
706 aa
AA seq
DB search
MDVWLLLISVLLGLSKAQIDVNECTKASAQSCGECIQAGEKCGWCTDEKSTRCDELDALI
KKGCSNGSIENPRGRVRVNKNQPVTNRAKDGVKLKPDQITQIQPQKLTLDLRSGEAQTFH
LKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTHLMRKIQTITSDFRIGFGSFVGKTV
MPYPCTSDQNCTSPFSFKNVLSLTEDGSQFNNLVSKQKISGNLDPAEGGFDAIMQVAVCA
NQIGWRNVTRLLVFSTGTGFHFAGDGKLGNIVLPNDGKCHLQDNMYTRSHYDYPSIAHLV
QKLSENNIQTIFAVTEKFQPVYQELKNLIPKSAVGTLSSDSNNVIDLIIDAYNSLSSEVI
LENSRLPEGVSISYVSHCKNGVSEKGENGRKCSNISIGDEVTFEVAITAKGCPSNGKSET
IKIKPLGFTEEVEIVLNFICECECHKDGIPNSPVCHFGNGTLECGACRCNEGRIGRTCEC
SKDEVRTEDLDANCRVDNDTDICSNNGDCVCGTCECKKRDNPEERYSGKFCECDNFSCDR
SNNKLCGGHGRCECQKCICDPNYTGSACDCSLDTTTCLASNKQICNGQGTCECGQCKCSN
PKFQGPTCEICPTCPGVCTEHKDCVQCRAFGIGDKKDTCEKECGGFDLKVVKKKEDLLLP
NDQPYINHCKERDVNDCWFFFTYATKEDGTIEVQVAEDLECPSGPA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgtggttgctcttgatttcagttctgcttggactcagcaaggcacaaatagat
gttaatgaatgcaccaaggcctcggcccagtcctgtggcgaatgcattcaggccggagaa
aagtgtggctggtgtacagacgagaaatccacacgctgtgacgagcttgatgctctgatt
aagaagggctgttctaacggcagcatagaaaatcctcggggaagagttagagtcaacaag
aaccaacctgtaacaaatcgtgcaaaggatggagtaaaactgaaaccagaccagatcacc
cagattcagccacagaaactcaccctagacctccgatcaggcgaagctcagacgtttcat
ctgaaattcaagagagctgaggattatcccatagatctctactacctgatggatctcagc
tactctatgaaagatgatttagagaatgtcaaaaacctgggaacccacctaatgagaaaa
attcaaacaatcacatctgacttcaggattggtttcggctcctttgtagggaaaactgtc
atgccatatccctgtacatcagaccagaactgcactagcccattcagctttaaaaatgtg
ctgagtctgactgaggatggatctcagttcaataaccttgttagcaagcagaagatctca
ggaaacctggaccctgcagagggaggtttcgatgccatcatgcaagtggctgtctgcgcg
aatcagatcggctggaggaatgttacccgtctgcttgtgttttccacgggcactggattc
cactttgctggagacggaaaattaggcaacattgtgcttcctaatgatgggaaatgccat
ttgcaggataacatgtacaccaggagccattatgactatccatccattgcacatctcgtt
caaaaattaagcgaaaacaacattcagaccatttttgcagtaactgaaaagttccagccc
gtttaccaggagctgaaaaacctcattccaaagtcagctgtgggcacattatcctccgac
tccaacaacgtgatagacctcattattgatgcatataattctctgtcctccgaggtcatt
ctggagaacagcaggctgcccgaaggtgtgtccatctcctatgtgtcccactgcaagaat
ggagtgagtgaaaaaggagaaaatgggagaaagtgctccaacatctccattggggatgag
gtgacatttgaggtagcgatcacggctaagggttgtccatctaatggcaagtcagagacc
ataaagatcaaacctctgggcttcactgaggaggtggagatcgtcctcaacttcatctgc
gaatgtgagtgtcacaaagacggaatcccaaacagcccagtgtgtcacttcggcaacggt
accctggagtgtggagcatgcaggtgcaatgagggacgtatcggcaggacttgtgaatgt
agcaaagacgaggtgagaacagaagatctagatgcaaactgccgtgtggataacgacaca
gacatctgcagcaacaatggagactgtgtttgtggaacttgtgagtgcaaaaaaagagac
aacccagaggagagatacagcggaaagttctgcgagtgcgacaacttcagctgcgaccgc
tccaacaacaagctctgtggaggtcacggtcgttgtgaatgccaaaagtgtatctgtgac
cctaactacaccggcagtgcatgtgactgctctttggacaccaccacctgtctggccagt
aacaaacagatctgtaacggtcagggcacctgcgagtgcggccagtgtaaatgttccaac
ccaaagtttcagggtccgacctgtgaaatctgcccaacctgccctggagtttgtactgag
cacaaggattgcgtccaatgccgagcatttggtattggtgacaagaaagacacatgtgag
aaagagtgcggtggctttgatcttaaagtagtgaagaagaaggaggatcttcttctgccc
aatgaccaaccctacatcaatcactgcaaagagcgggatgttaacgactgttggttcttc
ttcacctacgctacaaaggaagacggcaccattgaggtccaggtggcggaggatcttgag
tgtccctctggccctgcttaa
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