Chanodichthys erythropterus (predatory carp): 137002991
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Entry
137002991 CDS
T10334
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137002991 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cery03021
]
137002991 (smarcd3a)
03036 Chromosome and associated proteins [BR:
cery03036
]
137002991 (smarcd3a)
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137002991 (smarcd3a)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137002991 (smarcd3a)
PBAF complex
137002991 (smarcd3a)
GBAF(ncBAF) complex
137002991 (smarcd3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
137002991
NCBI-ProteinID:
XP_067219088
LinkDB
All DBs
Position
16:complement(32342612..32366291)
Genome browser
AA seq
505 aa
AA seq
DB search
MDMEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPALDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPATNEISARQMDMREAQSDPAIGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDAEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDP
IVINHVISVDPNDQKKTACYDIDVEVDDPLKSQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggattctgccggaggagctcgtaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccagggatgacttcaggggcacggatgccccatcaagga
gctcccatggggcctcctggacctccatatggaggaacaccgccaattcgaccagggatg
cctaacccagccctagaccccaaccgaaaacgtcctgccccgacccagcccgtgcaacct
ccccctgtccagaaccgtcccagaaagaaaccacttggatttccagcaacaaatgagata
tctgcgagacagatggacatgagagaagcccagtcagatcctgcaattggatccaatgcc
aagagaagaaaaatggcagacaagattctccctcagaggattcgtgaactggtgccagag
tcccaggcgtacatggacctcctggcttttgagcgcaaacttgaccaaaccattatgagg
aagagggtggatatacaggaagccctcaaaagaccaatgaagcaaaagcggaagctacgc
ttgtacatttcgaacactttcaaccctgccaaacctgatgcagaggactctgagggcagc
attgcatcatgggagctgcgtgtagagggcaaattattggatgatcctggaaaacaaaag
aggaagttttcgtctttctttaaaagccttgttattgagctggacaaggatctgtacggc
cctgataaccacttagtggagtggcaccgcacccctacaacccaagagacagacggcttc
caggtgaagaggcccggcgatgtgaatgtgcgctgtaccctcttgctcatgctggattac
cagcctcctcagtttaagttggatcctcgcctcgcacgtctccttggcatccacactcaa
acccgctcctgcatcatccaggcattatggcagtatgtcaagaccaacaagctgcaggat
tctcatgaaaaggagtacatcaactgtgataaatatttccagcagatcttcgactgtcct
cgtctaaagttctgtgagattcctcagcgactaactaacctgctgctgccgcctgatcct
attgtgatcaatcatgttatcagtgtggatccaaatgaccagaagaagacagcctgctat
gacattgatgttgaagttgatgatcctcttaagagtcagatgaatggattcctgctgtcc
acagccaatcaacaagagattgcatccctagacaacaagatccatgaaactatcgagtcc
atcaaccaacttaagatccaaagagatttcatgctcagcttctccagagaccccaagggc
tacatccaggactggatctgctcccagaaccgggatctgaagctgatgacagatacagtt
ggaaatccagaggaagagaggagagcggagttttataaccagccctggtctcaggaagct
gtcagtcgctatttctattgcaagattcaacaacgaagacaggagcttgaacaggcttta
gcaatgcgaaccacttaa
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