Chanodichthys erythropterus (predatory carp): 137003063
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Entry
137003063 CDS
T10334
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137003063 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cery01002
]
137003063 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137003063 (shhb)
Peptidases and inhibitors [BR:
cery01002
]
Cysteine peptidases
Family C46: hedgehog family
137003063 (shhb)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Morphogens
137003063 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
DUF7764
Peptidase_M15_3
Hom_end_hint
Vint
Ribosomal_S6e
Alpha_L_fucos
Cas_Csy1
PT-HINT
Motif
Other DBs
NCBI-GeneID:
137003063
NCBI-ProteinID:
XP_067219183
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All DBs
Position
16:complement(30555721..30560215)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGNRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITKNSERYKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHSDESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIRDLKVGDRVLAADERGNVLLSD
FIMFMDQDPKTRRQFIVIETSEPLTKLTLTAAHLVFIGNASDSLGVTATFASNVKPGDKV
LVSDGTRKTLQSVNVKRIYTEEHEGSYAPVTAHGTIIVDQVLASCYAVIENHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSNVLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgcttttctgtgttttatcagcctgcttttg
acgccttgtggattagcctgtggtcctggtagagggtatggaaaccgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgttgccgagaaaacgcttggg
gccagcggcaaatacgaaggcaaaatcacaaagaattcagagagatataaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagcgctgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggcgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccattccgacgaa
tctttgcactacgagggacgggcggtggacataactacctcagacagggataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtctattacgaatct
aaagcccacatacactgctccgtcaaagcagaaaattcggtcgctgctaaatcaggggga
tgctttcctggatctggtacagtgacactcgcagacgggaggaggaaacatatcagagat
cttaaagtgggcgaccgggtgttagctgccgacgagagaggaaatgtcttattaagcgac
ttcattatgttcatggaccaagatccgaaaacgagaaggcaattcatcgtcatcgagacg
tcagagcctttaacaaagctcacgctcacagccgcgcacctagtcttcattggaaacgct
tcagatagtttgggtgtaacagcaacatttgccagcaacgtgaagcctggagataaggtt
ttggtgtcggatggcactcgcaagaccctccagagcgtaaacgtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtcacagctcacggaaccataatagtggatcag
gtgctggcttcgtgctacgcggttattgagaaccacaaatgggcacactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggctttttccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaatgtgctgtttcacatcggctcttgg
ctgctggacagagactctttccatccgctcgggatttcacacttaagttga
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