Chanodichthys erythropterus (predatory carp): 137003071
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Entry
137003071 CDS
T10334
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137003071 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137003071 (u2surp)
Spliceosome [BR:
cery03041
]
Complex A
U2 snRNP components
U2 related factors
137003071 (u2surp)
Complex B
137003071 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
137003071
NCBI-ProteinID:
XP_067219203
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Position
16:complement(28597892..28610539)
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AA seq
968 aa
AA seq
DB search
MADKTPGGAQKANSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDERAAAEIYEE
FLAAFEGGEGKVKTFVRGGIANATKEEAAVDEKKGKLYKPKSRILEAKSFLPLDTPPQFL
AIDKRNASKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPLPTTEGRRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNPNAPMPPPPKCKEEFEKTLSQAIVKVVIPTERN
LLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGDSP
TKWKTEDFRMFKNGSFWRPPPLNPYLHGTPEDEERDDDEEEESGKKGTLKDDERDKLEEL
LRGLTPRKSDIADAMFFCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVANASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPD
PFLIKLQNIFLGLVSLDPEKETEELVPEIPERTEDIDGAPIVEEELDGAPLDDVDGMPID
GAPIDGAPLDDLDGMPIKGSDDDLDGIPFDQKPGFKVAPSKWEAVDGAALEAQAVTTSKW
EIFDLPEESDKSKTSSSRETDSKDSLRSSSAAEQQSYSNPVREEYDSKSAKFFEMSEEKR
AKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKETEKDKEKEKEK
ERKDKEKSDVSHKEKDKDESTPGRKEKKRRHSPSPSPTRSSSSRRGRSPSPRSERSDRSY
TKDSSRSSYKDSPRDSNRKSSKRSPSPPRTPKRSRRSRSRTPKKSSKKSRSRSRSPHRSH
KKSKKSKH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggtggggcgcagaaagccaactctaaggctttattggaaagt
aagttaaaggcctttagtattggcaagatggcggttgctaaaagaacactaagtaagaaa
gagcaggatgaactcaagaagaaggaggatgaaagggcagctgctgagatctatgaagaa
tttcttgctgcctttgagggaggtgaaggaaaagtgaagacttttgtacgtggtgggatt
gctaatgccactaaagaggaagcggcagtcgatgaaaagaaaggaaagctctacaaaccg
aagtcaagaattttggaggctaaaagttttttacctttggatactccaccacagttttta
gcaatagataaacgcaatgcatcgaagaagggagataaagaaaagaaaaagagcaacctt
gaactcttcaaagaagaactgaaacagattcaggaggagcgcgatgagcggcacagattg
aagggccgagtcagtcgttttgagcctcttcctacaacggaaggaaggcgatcctcggat
ggttcttcacgaagaaaccgtccgtccagtgtcttggatgattcagctcctggctcacat
gacgttggtgatccgacaactacaaatctttatttggggaacataaatcctcagatgaac
gaggagatgctctgtcaggaattcggtcgttatggtccattagccagtgtgaaaattatg
tggcccaggactgatgaggagagggccagagaaaggaattgtggttttgtagccttcatg
acgagaagagatgctgaacgtgcacttaaacatttaaatggcaaaatgataatgaatttt
gaaatgaaactgggatggggcaaaggtgtaccaattcctcctcacccaatatacattcca
ccttcaatgatggagcacaccctcccaccaccaccctctggactgcccttcaatgcccag
cctaaagagaggctgaagaaccccaacgctccaatgcctccccctccaaagtgcaaagag
gagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctctctcatccatcgaatgatcgaatttgtggtgcgtgagggtcctatgtttgaa
gccatgatcatgaacagagaaatcaataatccgctctacagatttttatttgaaaatcaa
agtccagctcatgtctattaccggtggaagttatacaccatattacagggcgattctcca
acaaaatggaaaacggaagacttcagaatgtttaagaacggttctttctggcggccgcca
cctctcaacccatatttacatggcactcctgaagacgaggaacgcgatgatgacgaagaa
gaagaaagtggcaagaagggcaccttgaaagacgatgagagggataaactggaggagtta
ctccgaggtctcacgccgaggaagagcgacatagctgatgccatgtttttctgcctcact
catgctgatgcagctgaggagatagtggaatgcattgctgagtctctgtccatacttaaa
acacctctgccaaagaagattgcaaggttatatttggtgtcggatgtactgtataactcg
tcagcaaaagttgctaatgcctcctattacagaaaattctttgaaacaaaactttgtcag
atattttctgacctaaatgccacttataagacaatacagggccatttacaatcagagaat
ttcaagcaacgggtaatgtcttgtttccgtgcgtgggaagactgggctgtgtatcctgat
ccgttcctgattaagcttcaaaacattttcctgggactcgtcagcctcgatcctgaaaag
gagactgaagagctggtgccagagatcccagaaaggactgaggacattgatggtgctcct
attgtggaggaggagctggatggcgctcctttggatgatgttgacggcatgcctatcgat
ggagcgccaattgatggagcaccactcgatgacctggatggaatgcccatcaagggatca
gatgatgatctggatggtattccttttgatcaaaaaccaggttttaaggtcgctccttca
aaatgggaggcagtggatggtgctgctttggaagctcaagctgtaaccacgtcaaaatgg
gaaatctttgatctgccagaagaatctgacaaaagtaaaacaagttcatcacgagaaact
gatagtaaagactctctcagaagttccagtgctgcagagcagcagtcctacagtaatcct
gttagagaagaatatgattcaaagtctgcgaaattttttgagatgagcgaagagaaacgt
gccaaactacgagaaattgagcttaaagtcatgaagtttcaagacgagcttgaatctgga
aaaagacccaaaaaatctggacagagtattcaagagcaagtagagctttaccgggacaag
ttactacagcgggagaaggagaaagagacggagaaagacaaagaaaaagagaaagaaaaa
gaacgaaaagataaagaaaaatcggatgtttcccacaaagagaaggacaaagatgaatcc
acaccaggcagaaaagaaaaaaaacggaggcacagtccctcccccagccccacccgaagt
agcagcagtaggcgcggcaggtcgccctcaccacgatcagaacgctctgatagatcctat
acaaaagacagctctagatcatcttacaaagactctccaagagacagtaaccgcaagtct
tctaaaaggtctccttcacccccaagaacacctaagaggtcgcgtaggtccagatcaaga
acgcccaaaaaatcttcaaagaaatccagatctcggtcacgatcgcctcaccgctctcac
aagaaatccaaaaaaagcaaacactga
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