Chanodichthys erythropterus (predatory carp): 137003074
Help
Entry
137003074 CDS
T10334
Symbol
si:ch211-241e1.3
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04382
Cornified envelope formation
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137003074 (si:ch211-241e1.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137003074 (si:ch211-241e1.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137003074 (si:ch211-241e1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_I
Laminin_G_2
Laminin_II
Laminin_G_1
EGF_LMN_ATRN
EGF_laminin
BORCS6
Alanine_zipper
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
137003074
NCBI-ProteinID:
XP_067219207
LinkDB
All DBs
Position
16:complement(1662479..1682068)
Genome browser
AA seq
1492 aa
AA seq
DB search
MTSSAPCGPQGRRAQIPGRYHSSSLLRVGSLGVAHSKSSSSAALERMRINSAFIPGLESM
GCSDGREAGSSSPNHSSASDAASGMESLSCSSSEPPKETRSLASAEGRSSGRAKRTGDGS
LTGEGETIPERDRSYFTRIKRTGMSESIAWRSAALRAILYAALLALVSGGPRPEHRTPDH
PQREQAEWNQRVQYPALNDGQRVQFPSLHETQQVQFPSVDDGQRCAAGYYLDRSGQFARC
VPCSCNGHSNECEQNTGRCLNCQDDTVGEHCERCREGYYSNAAQRKCRVCPCPFSNEANN
FAVGCIEMNGRFQCLCKEGHTGERCERCATGYYGEPLVAGGRCRLCNCPGNLCDSKTGVC
RDSLELQDTNTEEQCEECDNCAQTLLNDLEKLDVELRRIKDQLDLDTLRPSSKEHLRKLE
EAITATTNLVNTFSFTVNNQMPKINQLERDVINLADDMDNLKEQARKRSEVSQKALANAE
NSHQRAKDLDTEAQNLLTKIKELLKQLMDSNSNGAVLPSADLAKLLEQSENLVKDMEKRS
FTNHKDAAKKEQAEANKFLEHVKNIIKQCDENEVASKRVDSLLSNYEAKLKELEDLLKQA
DNMVKKTNNQNDINTESLKDILKRVNDLESERDLVGDQIALAVNQLKDTQGLLNMFNDSK
KEYEQLAAQLNGAKTELKDKVQVISQAAAKEKIVKQAEEHAENMYKLAKELQEAVQNVSG
RSGVQTALSGIEAYKNITDAVNAAEEAAKKAKEAADKALNDVSEGDLINRATNLKNNGNN
LLKDAKNAAKDLKGATKELNNQKDRLQVAEEKKKALEKELLTVKDGLRGIQRDDIGNIID
AAKKAAAEANRTTSDIMDQLNDIKAEVNNISISPTVSNMDNVLNNVEMTVKNVSGSIPSL
LDKIEELNSQIGSGNNVSENINKIKELIEQAREAANKIVVPMKFTGTGYVEMRPPRDLDD
LRAYTSLTLSLQRPEKPPIRGDGTRRRRQAQQDEDNLFVLYLGKKDASGDFIGMALRNNI
LHVIYKLNGKEYEIKTTNITESSSDLSFFDKIDLYRIYQDAQVVHTQQFTSINPKAPQTK
ENLGELTHNLLDLNPDNVVFYVGGYPDDFTPPASLNYGKYKGCIEFSTFNDKFISLYNFK
NAVNINLETPCKRQISLISESDYFEGTGYAKVALERFPINLSIQEKVETRAKDALLLYLG
DETNDFYYSVSLERGYVVLRGQGNDYILEPIISVDKPSLTVETDVKLFITVGKEIKVRVG
NTEVKTTDNILQRFYHFYIGGIPNTLRERYNITIPALKGCVKIGTAGSITPEVKEKVGIG
RGCSSDFLMARKAEFNLDSALEKPLANFSLDDLNLSLGFRSTKSDGILLQNSKNNNDIEL
SMEKGYVILKFQGYMWKSTKQYQDGKWHYLSVAGQGQRTELRIDEEDVGQRERDSSSGPF
SSSLFLGKDNFKGCITNLYLRRPDSLYRAEDLSTYSSTGDVMLSTCSASQNM
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgtcagctccgtgtggacctcagggaagaagggcgcagatacctggcagatac
cactcgtccagcctactgcgagtcggctctttaggtgtagcccattctaagtcgagctcc
tcggcggcccttgagaggatgcggattaattcggcgttcatccctggcctggagtcaatg
ggctgtagtgacggcagggaggcgggctcctcgtcgccgaaccactcctccgcttcagat
gctgcgagcggcatggagtcattgagctgctcatcctctgagccgccaaaggagactagg
tcactcgcttctgctgagggacgcagttccgggcgtgcgaagaggacgggggacggctct
ctcacgggagagggagagaccatacctgagcgtgataggagttattttacacgcatcaaa
cggacaggaatgtcagagtcaatcgcatggaggagtgcagcattgagggctattctgtat
gcggccctgctagcgctggtttctggagggccccgaccagaacacaggaccccagaccat
cctcagagagaacaggcagagtggaatcaaagagttcagtatccagcattaaatgatggt
cagcgcgttcagttcccttccctccatgaaacacagcaggtccagtttccttcagtggat
gatggacagagatgtgctgctggttactatctagacagaagtggtcagtttgctcgctgt
gttccctgctcctgcaacggccactcaaatgagtgtgagcagaacaccggccgatgtctt
aactgtcaggatgatactgtgggtgagcactgtgagcgctgcagagagggatattactct
aatgcagctcaaagaaaatgcagggtgtgcccatgtcctttcagcaatgaagccaacaat
tttgcagtgggctgcattgaaatgaatggcagattccagtgtctgtgtaaagagggtcac
acaggcgaaagatgtgagcgatgtgccacgggatattatggtgaacctctggttgctggt
gggcgctgtcgtttgtgcaactgtcctggaaacttgtgtgattctaagactggagtgtgc
agggattctcttgagctccaagacacaaacacagaagaacagtgtgaagagtgtgataac
tgtgcacagacattgctgaacgatttggaaaagcttgatgttgagctgagaagaatcaaa
gatcagctggatttagatactctcagaccttcatcaaaagaacatctgagaaagcttgaa
gaagccataactgccacaacgaatctggtgaatacattcagcttcacagtcaacaatcag
atgcctaaaattaaccaactggaacgagatgttatcaatctggctgatgatatggacaat
ctaaaagaacaggccagaaagcgatcagaagtctctcagaaagctcttgctaatgctgaa
aacagccatcaaagggcaaaagatctggacactgaggcacagaacctccttacaaaaata
aaagagctcctgaaacagctcatggactctaacagcaatggagcagttctgccctctgcg
gatttagcaaaacttctggaacagtccgagaacctggtgaaagatatggaaaagcgaagc
ttcacgaaccacaaagatgcagccaagaaagagcaagctgaagcaaacaaattcttagag
catgttaaaaacatcataaagcaatgcgatgagaatgaagtggcatccaagcgtgttgat
agcctgctgagcaactatgaagccaagctgaaagaattggaggatttgctaaaacaggct
gataatatggtgaagaaaaccaacaatcaaaatgacattaatactgaaagccttaaagac
attctgaaacgagtgaatgatttggagagcgagagagaccttgttggggatcagattgct
cttgcagtgaaccagctgaaagacactcagggcctcctgaatatgttcaatgacagtaaa
aaggagtatgaacagcttgcagcacaacttaacggtgcaaagactgaactcaaagataaa
gtccaagtcatctcacaagcagcagccaaagagaaaattgtgaaacaggcagaagaacat
gcagagaacatgtacaaactggccaaagagctccaagaggctgtacagaatgtgagtggg
cgctctggtgtgcagaccgctctctctgggatagaggcgtacaaaaacatcacagacgct
gtcaatgctgcagaggaggctgctaagaaggccaaagaggcggcagacaaagcacttaat
gatgtcagtgaaggggacttaatcaacagggcaacaaatctgaaaaacaatggcaataac
ctacttaaagatgccaaaaatgcagctaaagatcttaaaggagcaaccaaagaactcaat
aatcagaaggatcgtttgcaagttgctgaggagaaaaagaaagcactagaaaaggagctg
ctcactgttaaggatggtttgagaggaattcagagagatgacattggaaatattatcgac
gcggctaagaaagcggcagcagaagccaatcgcaccacaagtgacataatggaccagcta
aatgacatcaaagcagaagttaacaatatctctattagtccaactgtttcaaatatggac
aatgttctcaataatgtggaaatgactgtcaaaaatgtgagcggatccatcccgtccctg
ctggataaaattgaagagttgaattctcagattggctccgggaacaatgtgtctgaaaat
attaataagataaaggaactgattgagcaagcacgtgaagctgctaacaaaattgtcgtg
cctatgaaattcactggtacaggatatgtggagatgcgcccccctcgagacttagatgac
ctgcgggcgtacacctctctcactctgtccctccagagacccgaaaaaccccccattaga
ggggatggcactagacgtcgtcgtcaggcacagcaggacgaagacaatctgtttgtgcta
tacctcggaaaaaaagacgcatctggagacttcatcggcatggctcttcgaaataatatc
ctgcatgtcatttataagctcaatggaaaggagtatgaaatcaagacaaccaacatcact
gagtcctcatctgatctgtctttctttgacaaaattgacctttacagaatttatcaagat
gcacaagtcgttcacacacagcagttcacatcaatcaatccgaaggctccgcagacaaaa
gaaaacctgggagagctgacacacaacctgctggatctcaatccagataatgtggtcttc
tatgtaggaggttatccagatgacttcacaccacctgcctcactcaactatggcaaatac
aagggctgcattgaattttccaccttcaatgacaaatttatcagtctctacaactttaag
aatgcagttaatattaacttggaaaccccttgcaagagacaaatctcactgatctcagag
tcagattactttgaaggcactggttatgccaaagtcgcgcttgaaagattccccatcaat
ctatcgatccaggagaaagtggaaacccgagctaaggatgcccttttgctgtatttagga
gatgagactaatgatttttactacagtgtctctcttgagagaggttacgttgttctacgt
ggccaagggaacgattatattttggagcccatcataagtgtagataaaccaagcctaact
gtggaaacagatgtgaaattgttcattactgtagggaaagagattaaggtcagagtaggg
aacacagaggtcaaaacgacggacaacattctacaaaggttctatcacttctacatcggt
ggcatacccaacactttgcgtgagagatacaatatcactatccctgctctgaaagggtgt
gtgaaaatcggcactgctggtagtataacgccagaggttaaagagaaagtagggattggc
agaggctgctcaagtgactttctgatggccaggaaagctgaattcaacctagacagtgca
ttggagaaaccccttgcaaacttcagcttagatgatctgaacctttcactgggtttcagg
agtacaaaatcagacggcatcctgctgcagaacagcaaaaataataatgacattgaactt
tccatggagaaaggatatgtgatcctgaaattccaaggctatatgtggaaatctactaag
caataccaggatggtaaatggcattatctctctgttgctggacagggtcaacgcactgaa
cttcgtattgacgaagaagacgttggacagagagagagagactcttcatctggaccattt
tcctctagcttgttcctgggcaaggacaactttaagggctgcatcaccaacctttatctc
aggagacctgattctctttatagagcagaggacctgagtacttactcttccacaggagac
gtgatgttgagcacatgcagtgcctcacaaaatatgtag
DBGET
integrated database retrieval system
