Chanodichthys erythropterus (predatory carp): 137003159
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Entry
137003159 CDS
T10334
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137003159 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137003159 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137003159 (tnr)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137003159 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_Tenascin
FN3_Tor_3rd
EGF_2
Interfer-bind
Fn3_Dep-1_4th
DUF4998
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
137003159
NCBI-ProteinID:
XP_067219312
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All DBs
Position
16:34360420..34427867
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AA seq
1350 aa
AA seq
DB search
MWGCTMAIQGSVVSLALLFFGIQAVPNPTNKLVRTTRVRRQVPEGGGPPNNQTQPMIFNH
VYNINVPLESLCSVDLDAVPGPEINKGIIGSDKMPTEYTEETVDSDSQVTFTHRINIPKQ
ACACPAATTMEQLANRIEMLEREVSLLRAQCSSSCCGESSVMGHLDFIPQCGHGTFSMEV
CGCVCEEGWIGKNCSEPRCPDDCSGQGICIEGECVCDRNFGGENCSEPRCPGDCSGRGLC
IDGECVCEEAYAGEDCSQGRCLNDCSDQGTCVNGTCQCRSGFLGEDCSLIFCANNCSQKG
VCKDGFCACQEGYTGDDCTSVSPPMNLQVQGVSENTIDLQWEGPVFLTDYLITYAPTTPG
GVQLEIRVPGNVTNTTIKGLEPGLEYNINVYAVIDNIISAPMNTLASTYLTNPDGLLFKS
IMETSVEVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGLKPGEEYTVNLV
ALKDQGRSLPVTATVITLIDGPTQLIVRDISDTVAFVEWSPPKAKVDQIILRYGLVGVDG
PKTTFRLQPTLSQYSLQVLRPGSTYEVSVCGVRNGTESGGISTEFTTEIDAPKNLRVLSK
TSTSLELEWDNSEADVEGYSVVYSTLAGDQYDKVIVPRNEGTTTKTTLNDLLPGTEYGIG
ISAVVGANQSTPATMNARTGLDVPLDLTVTASTDNTITLLWGTVQGPIDHYRVTYTSSTG
VTTELTVPKDVTTTTLTGLEPGTEYTITVAAQRGRQQSTAATIDAFTGFRPITQLFFSEV
TSDSLTVAWSAPAPPADAFILNYSAQDSSDDSEIALDGSKTRITLTGLLPSRRYTVTLVT
MHGNVTSKPVIGSVTTGMDPPRDMTVLYVTEESVTISWIQPLAPFDYYKMSYQSPKGRMD
NVVIDNDVTNYTLTSLHPATEYEIKLNAVRGSQESKVITTTVFTAMDMPMELTALNVTPQ
GALLRWNPPVSSVDNYVLTLTRNQVTADTFLVEGSKQEYQLSQLIPSTTYSVALYATKGP
LTSGTVIANFVTPMDAPQNLTASEINHRSALISWQPPIADIDNYMLTYKAADGSRKELIL
DAEDTWIRLEGLAETTEYTVRLQAARGLETSAIVSTSFTTGNRLFPTPQNCAQHLLNGES
LSGIYTIYINRDLSQGVQVYCDMTTDGGGWIVFQRRQNGLTDFSRKWSDYKIGFGNLEDE
FWLGLDNIQKIAAQGRYELRIDMKDGQESVYANYDRFSIGDSKSLYKLRIGEYNGTAGDS
LSYHQSRPFSTKDKDNDIAVTNCAMSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWK
GHEFSIPFVEMKMRPFNYRSISGKRRRSTH
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtggggatgcaccatggcaatacaaggttcagtagtgagccttgctctactgttcttt
gggattcaagctgttcctaaccccaccaacaaactagtgaggaccacaagggtgagacga
caagttccagaaggtgggggtccccctaataaccagacccagcccatgatcttcaatcat
gtatacaacatcaacgtacctctagagtctctctgttcagtggacctagacgcagtacca
ggcccagagataaacaaaggtataatcgggagtgacaagatgccgacggagtacacagaa
gaaacagtggactcggacagccaggtgaccttcacccatcgcatcaatatccctaagcag
gcctgtgcttgtcctgcggctaccaccatggaacagctggcaaaccgcatagagatgctg
gagagggaggtgtccttgcttcgagcacaatgtagctccagctgctgtggagagagctct
gttatgggtcacttggacttcatccctcagtgtggccatggcaccttcagcatggaggtt
tgtgggtgtgtttgtgaagaagggtggattggcaagaactgctctgaaccccgctgccca
gatgactgctccggccagggcatttgcatcgaaggcgagtgtgtatgcgaccgtaacttt
ggcggtgaaaactgctcggagcctcgatgtccaggtgattgctctggcagggggttgtgc
attgatggtgagtgtgtctgcgaggaagcctatgctggggaggactgctcgcagggcaga
tgtctgaacgactgctcagatcaaggaacctgtgtgaacggaacctgccagtgcagatcc
ggcttcctgggggaggactgctctcttatcttctgtgctaataactgtagccagaaaggg
gtgtgtaaggatggtttctgtgcctgtcaagagggatatacaggagatgactgcacttca
gtgtcacctcctatgaatctgcaagttcagggagtgtcagagaacaccattgatctgcag
tgggaggggccagtgttcctgacagactatctcatcacttacgcccccacaacccctggt
ggagtccaactagagatcagagtcccaggaaacgttaccaacaccaccatcaaagggttg
gagccgggtctggaatacaacatcaacgtgtacgcagtgattgacaacatcatcagtgcc
cctatgaacaccttagcctctacctatctcacgaatccagacggtttactcttcaaatcc
atcatggagacatccgtggaggttcagtggcaacccttagactacttgtttgatggttgg
gaaataagcttcattcccaaggacaatgatggagggatgacagcgcaactacccagtacc
atcacgtcgttccaccaaacagggctgaagcctggagaagaatacactgtcaacctggtg
gccttgaaagaccaaggcaggagcctgcctgttactgcaaccgttatcacactaatcgat
gggccaacgcagcttattgtgcgagacatctcagacacggttgcctttgtggagtggagc
ccacccaaggctaaagtggaccagattatattgcggtatgggctggtaggggtggacggg
ccaaagaccacctttcgcctgcagcccactctgagccaatactccctccaagtactgagg
cctggatccacgtatgaagtatcagtttgtggagtccggaatggcactgagagtggaggc
atttccacagagttcacgacagaaattgatgcaccaaagaacctgagagtgctgtcaaaa
acgtccactagcctggagctggaatgggacaatagtgaggcagatgtagaaggctacagt
gtagtctacagcactctggctggcgatcagtatgacaaagtcattgtcccacgcaacgaa
ggcaccaccaccaaaactactctcaatgatttactgcctggcactgagtatggcatagga
atttcagctgtcgtaggtgccaaccaaagcaccccagcaacgatgaatgccagaacgggt
ctggatgtccccttggatttgactgtcacagcctccaccgacaacaccatcacgctgttg
tggggtacagtgcaggggcctattgaccactatagggtgacctacacatcctccactgga
gtcacaacagagcttacggtgcccaaggatgtcaccaccaccacactgacaggtctagag
ccgggcactgagtacaccattacagttgcagcacagagaggcaggcagcagagcaccgca
gccactattgatgccttcacagggttccgccctatcacgcagctcttcttctctgaagtc
acatctgattcattgactgtggcgtggagtgcaccggcaccgcctgctgacgcattcatc
ttgaactacagtgctcaggactccagtgatgattctgaaattgctctggatgggtccaaa
accagaatcaccctcactggtctcctgccctccaggcggtacactgttaccttggttacc
atgcacggcaatgtgacctcaaagccagtaataggctcagtcacaacaggaatggatcct
cccagagacatgactgtgctgtacgtcactgaggaatctgtaaccatatcatggattcag
ccacttgcaccctttgattactacaaaatgtcttaccaatcaccaaaaggtaggatggac
aatgtggtgattgacaatgatgtcaccaactacaccctaaccagcctccacccagcaaca
gagtacgaaatcaagctgaacgcagtgagaggaagccaagagagcaaggtcatcaccact
actgtcttcacagctatggacatgcctatggagctcaccgcattgaatgtcacacctcag
ggggctctgctacgttggaacccccctgtttccagtgttgataactacgtgctcaccctc
actcgtaaccaagttacggcagacaccttcttagtggagggtagcaagcaggagtaccag
ctgagtcagctcattcccagcaccacctactcagtggccctctatgccaccaaaggtcct
ctcaccagtggcactgtcatcgccaactttgtcacacccatggatgcgccccagaacctg
acagccagtgagattaaccatcgaagcgccctcatatcctggcaaccgcccatcgcagac
atcgataactacatgctgacctacaaagcagcggacggcagtcgaaaggagctgatctta
gatgccgaagacacatggatccgtctcgaggggctggcggagaccaccgaatacactgtg
agactgcaagccgccagaggattagagaccagcgccattgtttctacttctttcacaaca
ggaaaccggttgtttcccacgcctcagaactgtgcacagcacctcctgaatggagagtcc
ctgagcggaatctacaccatctacatcaacagagacctcagccaaggtgtgcaggtttac
tgcgacatgaccaccgacggaggcggctggatagtgtttcagcgacgtcagaatggtttg
actgatttctccaggaagtggagtgactacaagatcggctttggcaacctggaggatgaa
ttctggcttgggttggacaacattcagaagattgcagctcaaggtcgttacgagctccgc
attgacatgaaagatggccaggagtccgtatatgccaactatgacaggttttccattgga
gattccaagagcctctacaaactgaggataggagagtataatggcactgcaggtgactct
ctgagctaccaccagagcagacctttctctaccaaggacaaggacaatgacatcgctgtc
accaactgtgcaatgtcctacaagggagcctggtggtacaaaaactgtcatcgggccaac
cttaatggaaaatacggagagtccagacatagtcagggtataaactggtatcactggaaa
ggccatgagttttccatcccttttgtggagatgaagatgagacctttcaactaccgcagc
atcagtggcaagcggaggaggtccacccattaa
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