Chanodichthys erythropterus (predatory carp): 137003357
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Entry
137003357 CDS
T10334
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cery01002
]
137003357 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137003357 (vcpip1)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137003357 (vcpip1)
Peptidases and inhibitors [BR:
cery01002
]
Cysteine peptidases
Family C64
137003357 (vcpip1)
Ubiquitin system [BR:
cery04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
137003357 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
137003357
NCBI-ProteinID:
XP_067219582
LinkDB
All DBs
Position
16:3097645..3105608
Genome browser
AA seq
1108 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVPGPPKKGSELVKVMGLSNYHCKLLSPILTRYGMDKQTGTAKLLK
EMNQGDIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLNHYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSPGDYSATFLPGLVPEE
RCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIRKYVS
LDSSGSCVIGGDRSLQDKYLLRLVGAMEDVFMDKYGIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHAPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLSSLTACTWCHGTSVRRVQGDGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDPTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQDEYNPVAIEGAHVQDGGIGSESSARPPTKI
ILTGQKGKTLHKEELVMSRTERVLQHSISEQAALSQRRSTDRVRQQDPRPSSPSSSSSSA
PPTPTKVPPTSGEKKIRVTTSDGRQAMLTLQPHTTYSDLQNSIIQVFNLSPGQLCIRHGF
PPRELPPPRPEDQNQPVALQHGDRISVEALKESSPDTHMTQTHTHAPQTHAHSDPHLSRT
SSRELQDNIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHC
TLPHLSGKTFVFNASEERLELCVDTAGHFPVGPDVEELVQEALSQLRSDAASRSREGSPA
HSLRLGTGGAVRKKEQNVTVFQGKGHSLGSAPPEHPPIRRQHSSGVDLSSSVREEGLTLS
GEDLVRVAPGMLTLREGRGMGLEPAVIEAQRQRLQEMVSSIQASMDKHLRQHAAARHDGE
EEETPEKQEEMEGHGAEPPNTFEPMDQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcaaagcagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
acggagtgcggccagagacacgagcagaagaatctcgcgaatgtggaggaagtgactgac
ccagatgtagtgcttcacaatttgctgagaaatgctttgctgggcgtgcctggccctccc
aaaaagggctcagagctggtgaaagtgatgggactgtccaactatcactgcaagctgctg
tcacccatcctcactcgctatggcatggacaaacagacgggcactgccaaacttttgaag
gaaatgaaccagggagacattttcgactgctcgcttcttggtgaccgtgcatttctcatc
gagcaagagcatgtgtcaactgttgggtatggacgtgatcggtcagggagcctgatctac
ctgcatgacactttggaggagatcaagaaagcaaacttgaatagagagtgtcttattccc
gtgcatgtggatggagacggacactgcctggtccacgccgtgtccagggctttagttgga
cgtgagcttttctggcatgcccttcgagagaacctaaaactcaatttcaagcagaacctc
aaccactacaaagctcttttccaggactttatagatgccgcagaatgggaagacatcatt
aacgagtgtgacccgttgtttgtacctccagaaggcgttccattgggcctgaggaacatc
cacattttcggcttggcaaatgtactgcacagacccataatcctgttggactcactgagc
ggcatgcgcagcccaggcgattactccgccaccttcctgccgggcttggttccagaggag
cgttgccgaggaaaagatggcactctgaacaaacccatctgcatcgcctggagcagctct
gggagaaatcactatctgcccctagtgggaatcaagggcttgcctttgccccgtttgcct
gctgcgctgctcccgaaagcttggggtgttcctcaagagctgattcgcaaatacgtgagc
ttggactccagtggaagctgtgtgatcgggggcgaccggagcctgcaggataaataccta
ctgcggcttgtaggcgcaatggaggacgtcttcatggacaagtacggcatccaccccgct
cttgtcgctgacgtccaccagtacatatatcgacgcactggagtgatcggcgtgcagccg
gaggaggtcacagaagcagcgaagaaatccgttcaggagggccgtctccaccgctgcctt
gtctgcaatgccctttcagagctccacgcgccagcagagtggctgattccgggagggaaa
ctctacaacttggccaagtcgactcatgggacgctgcgagcggacaagaactacagcttt
cctttgaatagtttggtttgttcctataacccagaaaaagatgtgctcgtgcctgactac
aaactcagctcgctcacagcctgcacctggtgtcacggaacctcggtgcggcgcgttcag
ggcgacggctctgtagtctatttggacggagaccgtaccaacactcgctcgcagggtggg
aagtgcggctgtgggttcaagcacttctgggaggggaaggagtatgacaatcttcccgaa
gccttccccatcactctggagtggggcggccgtgtggtgcgagagaccgtttattggttc
cagtacgaaacggatccgacgctcaacagtaacgtttacgacgtgacaatgcggctcgtc
acgaagcacttccccggtgagtttggcagcgagatcctagtccaaaaagttgtgaacacc
attttgcatcacaccgccaagcggagccaagacgaatacaatccagttgccatagaaggt
gctcacgtgcaggacgggggaatcgggagtgagtcgtccgctcgccctcctactaaaatc
atcctgactggacagaagggcaaaaccctgcataaagaggagctggtgatgagcagaact
gagagggtcttgcagcacagcatcagcgagcaggcagccctctcacagcgccgcagcacg
gaccgcgtgcgccagcaggatcctcgcccatcatccccgtcctcttcatcatcttctgca
cctcccactcccaccaaagtgccacccaccagcggagagaagaagatacgtgtaacaacc
agcgatggccggcaggccatgcttacgctgcaaccgcacaccacatacagtgatctccag
aactccatcatccaggtcttcaacttgtcacccggacagctgtgcatccgacatggcttc
ccgcctagagagctgcccccaccacgtcccgaggaccagaaccagccagtggcactccag
catggtgaccgcatctctgtggaagcgctgaaagagagctcacccgatactcacatgacc
cagacgcacactcacgcgccccaaacgcacgctcactctgacccacacctcagtcgcacc
agtagcagggaacttcaggacaacattgaccttgagatgtcatcactctgtctcctggca
gcacttatgggtgaagatgtctggtcttatgctaagaaactgcctcacctgttccagcaa
ggaggagtcttctacaatattgtgaagaaagacatgggtctgttggacgggaaacactgc
acactgccccacttgtctggaaagacatttgtgttcaatgcatcagaggagcgtttggag
ctgtgtgtggacacagccggtcattttccagtgggccctgacgtggaggagctcgtccag
gaggccctttcccaactccgctcagatgcagcctcccgtagccgcgaaggaagccccgcc
cacagcctgcgattgggcaccggcggcgcagtgcgcaagaaagagcagaacgtcaccgtc
ttccagggcaaaggccactcattgggttccgcccctcctgaacacccaccaatcaggcgg
caacacagcagtggtgtggatctcagcagcagcgttcgcgaagaagggttaacgttgtcg
ggggaggatttggtgcgcgtggccccgggcatgctcactttacgtgagggccgcggcatg
gggctggagcccgctgtgatcgaggcccagcggcagcgcctgcaggagatggtctcaagc
atacaggcgtccatggacaaacacttgcgccagcacgcagcagcaaggcatgatggggag
gaagaagagactcctgagaaacaggaggagatggagggtcatggggcggagcctcccaac
acctttgagcccatggaccaatcctga
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