Chanodichthys erythropterus (predatory carp): 137003399
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Entry
137003399 CDS
T10334
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137003399 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137003399 (prpf38b)
Spliceosome [BR:
cery03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137003399 (prpf38b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
137003399
NCBI-ProteinID:
XP_067219642
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Position
16:complement(6464566..6471993)
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AA seq
494 aa
AA seq
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MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPPDLIDWYDEFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQRDEQEEEEAATATDSTRHGD
RRRSRTPKRSPSPRRSQNRSRSRSHHKERHGASFDRELERERDRQRKEREGKDRDRDRDR
ERDRERDRDRRRSRTPDRTTERRRSRSRERRRSHSASREKRNERKERDKEREAESERERS
RRKDRDHHKDRERSKDKRSKGEGEERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTERS
SKKRSRSGSRSRQEAGEEKNRKRERSHSKERSHKRSRSKERPHRRESSNGREHVKQDRHS
PEPGERNNVRAESP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggccggcgggaaa
cacggcaacgttttgccgttatggggcaacgagaaaactatgaacctcaacccgatgatc
ctgacgaacgtcctgtcgtctccctacttcaaggtccaactgtacgagctcaagacgtac
cacgaggtggttgacgagatctacttcaaggtcacccacgtggagccatgggaaaaaggc
agcaggaagactgcggggcagacgggaatgtgcggaggggttcgtggagtcgggacggga
gggatcgtgtccactgctttttgtttgctgtataaactatttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcacacagattcgccctatatcagggcactgggcttc
atgtacatcaggtatactcaacctcctcctgacttgattgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggaggatgtgtaatgactgttggagag
atgctccgctccttcttgaccaagctggaatggttctcaacattgttcccacgaatacct
gttcctgtgcagaaggcaatcgaccagcacatgaagagccgaccacgtaaacccccgcaa
agagatgagcaggaggaggaggaggcggcgacggcaaccgattcaacaaggcatggagat
aggcgccgttccagaacacctaagagaagtccgagtcccaggagatcccaaaatcgttcc
cggagtcgcagccatcacaaagaaagacatggcgcaagcttcgaccgtgaactggagaga
gaacgagatcgccagcgcaaagaaagggagggaaaggaccgggatagagacagggaccga
gagagagacagggagagagaccgagatagacgacgttccagaacaccagaccgaaccaca
gaacgccgacgcagccgtagcagggaacgacgccggagtcacagtgccagccgggagaag
cggaatgagaggaaagaacgagataaagagagggaggcagagagcgagagagagcgtagt
cgcaggaaagacagagatcatcataaagatcgggagaggtcaaaagacaagagaagtaag
ggagagggagaagagaggaggcacaaagaagataaggaggatagaaagcacagggaggaa
aagaggagtaagcgctcaaggagcagaagcagagacaggaaacacaaaaccgagcgatct
agcaagaaacgctctcgctcaggcagcaggagcaggcaggaagccggggaggagaagaac
aggaagcgggaacgcagccatagtaaggaacggtcacacaagcgcagtcgcagcaaagag
cgcccacaccgtagagaatccagcaatggacgagaacatgtaaaacaagatcgccacagt
cctgaaccaggtgaaagaaacaatgttcgagcggagtctccctga
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