Chanodichthys erythropterus (predatory carp): 137003468
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Entry
137003468 CDS
T10334
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04115
p53 signaling pathway
cery04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137003468 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
137003468 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137003468 (cop1)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137003468 (cop1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137003468 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
137003468 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
Beta-prop_EML
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4_3
Beta-prop_WDR90_POC16_2nd
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
zf-RING_10
WDR90_beta-prop_4th
zf-rbx1
UvrD-helicase
zf_C2H2_10
Sina_RING
Terminase_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
137003468
NCBI-ProteinID:
XP_067219742
LinkDB
All DBs
Position
16:34177164..34193167
Genome browser
AA seq
687 aa
AA seq
DB search
MSSTRQPQSGGAAGSVPGTSSGSMSSSGGAGVANSGSSGAQNGNSSGNGVSSRTLGSVVE
GQSSRLGSSSRKRPLYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSL
EDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGA
DQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQLQKELNF
LEEDIKRVEEMSGVYSVSDMDPNLDSTVPQFEAPSPAPSSSIIDPTEYIQPPFGGSSQGK
RQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTRYNS
VRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPV
NEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLM
DPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYD
LRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKN
FVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVC
WRALPDGESNVLIAANSQGTIKVLELV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcactcgacagccgcagtctggcggtgcagcggggtccgtccctgggacgagc
tctgggagtatgagcagcagcggcggcgccggtgtagcgaacagcgggagtagcggcgct
cagaacgggaacagttcgggtaacggggtgtcctcgcggactctgggctcggttgtcgag
ggacagagctctcgactgggctcgtcaagcaggaaaagacccctgtacaacggtctgatc
aatccctatgaggacaagagtaatgattttgtatgccctatatgttttgagatgattgag
gaagctcacatgacaaagtgtggccacagtttctgttataaatgtatacgacagagtttg
gaggacagcaacagatgcccgaaatgtaattatatcattgacaatgtggatcaactttac
cccaacttcttagtgaatgagctgatcctgaaacaaaaacagagatctgaagagaagcgt
ttgaaacgagatcatcctaatggaaccaaatggcaggttttccaagacgtccttggcgca
gatcaagagaatatggatttagccaatgtcaactacatattagagtacctgttgcaaaaa
aagaaacaactggaggcggaatcacaagctgctcagcgccagatcttaatggaattcctg
aaagaagccagaagaaataaaagagagcaactggagcagttacaaaaagaactgaacttt
ttggaagaggatatcaaacgagttgaggaaatgagcggtgtgtactcagtgagtgacatg
gaccccaatttagacagtactgtaccccagtttgaagctccctcacctgcacccagcagt
agcataatagaccccacggaatacattcagcccccttttggtggaagctcacagggtaaa
agacaaacatggtacaacagcactctagcgtcacggcggaagagactgacggcacacttt
gaggatctagagcagtgttatttctccaataggatgtctcgaataacagatgacagcagg
actgttaaccagctggatgatttcatggagtgtctatcaaaatttacccgttacaactct
gtgaggcctctggccaccctctcttacgctagtgacctctataatggctccagcattgtg
tccagcattgagtttgaccgcgactgtgattactttgccattgccggtgtcactaagaaa
attaaagtgtttgagtacggcactgtgatccaggatgctgtggacattcattatcctgtc
aacgagatgacatgtaactctaaaattagctgtatcagttggagtagctaccacaaaaat
ctgttggcgagcagtgactacgaggggactgtcattctttgggatgggttcacggggcag
agatcaaaggtctaccaggagcatgagaagcggtgttggagtgtcgatttcaaccttatg
gatcccaagctcttagcatcgggatcagatgacgcaaaagtcaagttgtggtccaccaac
cttgacaattcagtagccagcattgaagctaaggcgaatgtatgctgtgtcaagtttagt
ccatcctcgcgatatcaccttgcctttggttgtgcagaccactgtgtgcactactatgac
ctgagaaacactaagcagcccatcatggttttcaaaggccacaggaaagcagtgtcctac
gccaagtttgtcaatggagaagaaattgtgtctgcctcaacagacagccagctgaaactc
tggaatgtgaacaagcctcattgtttgcgctccttcaaaggccacatcaacgagaagaac
tttgtgggtctggcatctaatggagactatgtagcatgtggaagtgaaaacaactcgctg
tacttgtactacaaggggctctccaagacgcttctgactttcaagtttgacactgtgaaa
agtgtcctggacaaggacaagaaggaggacgacaccaatgaatttgtcagtgcagtctgc
tggcgagcactacctgatggggagtcaaatgtgttgattgcagccaacagtcaaggaaca
atcaaggtacttgagctggtctga
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