Chanodichthys erythropterus (predatory carp): 137003713
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Entry
137003713 CDS
T10334
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03015
mRNA surveillance pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137003713 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
137003713 (acin1a)
03015 mRNA surveillance pathway
137003713 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137003713 (acin1a)
03041 Spliceosome [BR:
cery03041
]
137003713 (acin1a)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137003713 (acin1a)
Spliceosome [BR:
cery03041
]
Complex C
Other components
EJC/TREX
137003713 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
137003713
NCBI-ProteinID:
XP_067220087
LinkDB
All DBs
Position
16:complement(37373918..37400987)
Genome browser
AA seq
1804 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDHEDHTEANDSIC
AAPNQDVAPSLVDQHKGGAAVGVTASENDELREKESPGQPSPSTPAQPSAIASLSVRVVG
ERGPTSSHVLADSDDDSEGGDDNDGEEEEWNAKAQRSRRAQPPKSQPVRERSGGSQQQQQ
QPPPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRISSSSSSGSS
SSDSRSSSPEPAGDSTERRPGPLTLLARKMESEGAFSGAGKRDREGIDGQRSHQEGVVSA
ITHTANAASVLSYPSSVISNQGVSVLRTAVTEESDGTKQDEGSHLLWEQDSKKKERHREQ
ERLKALEKERKERERVLEEERARILERERQEREEALKQERERALQREREEKEKALQRERE
ERERLERERALEQERLKREALERERQEKERLEKERLEKERQEREQALERERQERALEKER
LERERLEKERQEREQALERERLEKERLEKERQEREQALERERLEKERLEKERQEREQALE
RERLEKERLEKERQEREQALEKERLEKERLERERQEREQALERERLEKERLEKERQEREQ
ALERERLEKERLEKERQEREQALERERLEKERLEKERKEQEQALERERLEKERLEKERKE
QEQALERERLEKERLEKERQEREQALERERLEKERLEKERQEREQALERERQEREQALEK
ERKEKEKQEREQALERERLEREAALEKERQEIERAKEQERLERERALEKEAALERKRQER
ERLEKEKALEEEREREAQRKAEEERALEKQREKQESALKEEKQRALKESERLLEQKRVQE
EKEKALKHEKETHEKEEEREKESRLPPWKRGRDIGGFSCPAPHPVSLESPLEKPDESEAG
EPQSAGKDARSSESVPQQSPTLATPLSPQSSSKKSRFLRDAPLAAPLPCSPTSVLKRPRT
FSDSPMPQAPSIPLASKSGEPVHEDAFHAPQTSILVAAPHELESKTPELAAKKHAPQEEE
KIETSKDSEASRDTKHEMLKNIENEKKRGRERVKKEVEKKERKSSSSSDSSSSDSDSGSS
SSSRSSSSSSSSSSSEEEKSRPTSGGRRSKEVQKDSSSRPTEKVGQTVAVTEKPPTSQRK
KRVFTEQEEKDVCNEDVIKTKKPCLDLHDEKMETRRKDDIEEDDTNKDTTSEVKEAVMAE
PEKVPESSEESTTPKTFSARKISLGSSKPSPGVVSSEGEAETASGASAGRKRRWGSSTAV
TAKKPSISITTDSLKSLIPDIKPSLGQEAVLDLHPEEMHLSGEEEGGERGDQELKIRRTV
TQVVPSDTQENGQKESKRSEQEDEEERSEGRDRLSQEEKMEGSIQVSMETEPSPPWRDVD
VKPVAPSDTLIRRSISQQKSGVSITIDDPVRTAKQPSPPRGKLSNIVHVCNLVRPFTLGQ
LKELLNRTGTLVEEGFWIDKIKSHCYVTYSNTEEAMATRTALHGVKWPQSNPKFLSVDFC
TQEEVDFHRGLGPAGEKPPEEPRGAAAAGPGRPVPPPLLPERDQWAEREREMERRERSRA
EREWDRDKVRDFSKPGEEREAGARRSRSRERERRRKERGKSKERKTDKKEKGPEEPPAKL
LDDLFRKTKAAPCIYWLPLTEEQAAQRVAARAERMREREKRWKEMEEEDKKREEEHRERM
KTSGAAGGDGERDRDRERDRDRGREREREGDKRKEGYRRPGANSASGSRRSRSRSSPPPR
DRRR
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggaggccgctccattcgctccgggtggcg
gatttgaaagcggcattggaagaaagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctcaaaggggctctcatgttggagaaccttcagaaaacctccactcatcac
attggcctgcagcctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacctggccaaacagcaagagcttctcaggcagcgattggagagagaggcacgagag
gcagctgaaactgatggaacagaccatgaagaccacacagaggccaatgacagcatctgt
gctgcccctaaccaggatgttgcgccctccttagtcgaccaacacaaaggaggtgcagca
gttggggtgactgccagtgagaatgatgagctcagagaaaaagaatcacccgggcagcca
tccccctccacacctgcccagcctagcgcaatagcctctttgtcggtgcgggttgttggt
gaaagaggtccgacttcaagccatgtactggccgacagtgatgatgacagcgaaggtggg
gatgacaatgatggcgaagaggaagagtggaacgccaaagctcaacggagtcgtcgagca
cagcctccaaaaagccaaccggtgagggaaagatctggtggctcgcagcagcaacagcag
cagccgcccccccaacacatacctttactatcacagcagctcagacagcccactcctccc
ccatctcctcctcctgaactctctttccctctcccagacacccctaaacagagcccacct
agtcctggagagcccccatctaggcagcgcatatctagctcttcgagctctggtagttcc
agtagtgacagtcgtagcagtagccctgaaccagcaggtgactccacagaacgcagacca
ggcccgttgaccttactggcacgcaaaatggagtctgagggagctttctctggtgcggga
aagcgtgatagggagggaattgatggacagagaagccaccaagagggcgttgtatccgca
attacccatacagctaatgcagcatcagttctgtcataccctagttcagtgatctccaac
caaggtgttagtgtccttaggacagctgtgacagaggagagtgatggcacaaagcaggat
gagggtagtcatctattatgggagcaagatagcaaaaagaaggaaaggcacagagaacaa
gagaggctgaaagccctagagaaggagagaaaggaaagggagagggtattggaagaagag
cgagcacgcattttggaacgggaaagacaggaacgagaagaagctctgaaacaggagagg
gagagggctttacagcgggaaagggaggagaaagaaaaggccttgcagcgggagagagaa
gagagggagaggttagagagagaacgagcattagagcaagaacgcctcaagagagaagct
ttggaacgagagaggcaagaaaaggagagattggagaaagagaggctggagaaagaaagg
caagaacgagaacaagccttggagagggagagacaagaacgagctctagagaaggagaga
ttggagagagagcgccttgagaaggaacgacaagaacgagaacaagctctggagagggag
agattggagaaagagcggcttgagaaggaaagacaagaacgagagcaagctctagagagg
gagagattggagaaagagcggcttgagaaggaaaggcaagaacgagagcaagctctagag
agggagagattggagaaagagcggcttgagaaggaaaggcaagaaagagagcaagctcta
gagaaggagagattggagaaagagcggcttgagagggaaagacaagagcgagaacaagct
ctggagagggagcgattggagaaagagcggcttgagaaggaaaggcaagaacgagaacaa
gctctagagagggagagattggagaaagagcggcttgagaaggaaaggcaagaacgagaa
caagctctagagagggagcgattggagaaagagcggcttgagaaggaaagaaaagaacag
gaacaagctctagagagggagcgattggagaaagagaggcttgagaaggaaagaaaagaa
caggaacaagctctagagagggagcgattggagaaagagaggcttgagaaggaaaggcaa
gaacgagaacaagctctagagagggagagattggagaaagagcggcttgagaaggaaagg
caagaacgagagcaagctttggagagagagagacaagaaagagaacaagccctagagaag
gagaggaaggagaaagaaaagcaagaacgagagcaagctttggagagagagagactggaa
agagaagctgctttggagaaagagagacaagaaattgagagggccaaagaacaggaaagg
ctggagagagagagggctttggaaaaagaagctgctctggaacgcaagaggcaggagcga
gaaaggcttgagaaggagaaagctttggaagaagagcgtgaaagagaagcgcagagaaaa
gcagaggaagagcgagcattggaaaaacagagagagaagcaggagagtgctttgaaagaa
gagaagcagagagccttgaaggagagcgaaaggttgttggagcaaaaaagagtgcaggag
gagaaagaaaaggctttgaaacacgaaaaagaaacgcatgaaaaagaggaggaacgagag
aaagaaagccgtcttcctccatggaagcgtggtcgtgatatcggtggtttctcttgtcca
gctccccatcctgtttctctcgagagtccattggagaagccagacgaaagtgaggctggg
gaaccacagagtgccggcaaagatgctcgatcttcagagtctgtcccacaacagtcaccc
acacttgcaacaccactatcccctcaatcttcctctaagaagtcccgcttccttagagat
gctcctctggcggctcctctcccatgctctccaacttctgtgctgaagaggcctcgtact
ttctcagacagcccgatgccacaagccccctcaattccattagcatctaaatctggggaa
ccagtgcatgaagatgcttttcacgcccctcaaacatcaatcctagttgcagcacctcat
gagcttgagagcaagacccctgagttggccgccaaaaaacatgcaccacaagaggaagaa
aagattgagacatcaaaggacagtgaggcaagcagagacactaaacatgagatgctcaaa
aacattgagaatgagaagaaaagaggaagggaaagggtaaagaaggaggtggagaaaaaa
gaaagaaaatcatcatcctctagcgattcatcttcatctgactcggattctgggtcttca
tcctcctctcgctcctccagttcatcatcatcatcatcatcatcggaggaggagaaaagt
cgtcccacttcaggtggtaggaggtctaaagaggtccagaaagattcttcatctcggccc
acagaaaaagttggtcaaactgtggctgtgactgaaaagcctcctacatcccagcgcaaa
aaacgagtcttcacagagcaggaggagaaagacgtgtgcaatgaggatgtcatcaaaacc
aagaaaccctgccttgatctccacgatgagaagatggaaacaaggagaaaggatgatatt
gaggaagatgacactaacaaagacactaccagtgaggtgaaggaggctgtcatggcggag
cctgagaaggttccagagagcagtgaggagagcaccacgccaaagaccttctcggcccga
aagatctctctcggcagcagcaaaccgtctcctggggtggtgagttcggaaggggaagcg
gagaccgcaagcggtgctagcgctggcaggaagagaagatggggctccagtacagccgtc
actgccaagaaaccctccatcagtatcaccacagactctttgaagtctttaataccagac
atcaagcctagtttggggcaggaggctgtgttagacctgcatccagaggagatgcatctc
tctggggaagaggaaggaggagaaaggggcgaccaagagctgaaaattagacgaactgta
acacaggttgtgccctctgacacacaagagaatggacagaaagaatccaaaagaagtgag
caagaggatgaggaagaaagaagtgaagggcgggacagacttagccaggaggagaaaatg
gaaggctccatacaggtttccatggagacggagccatcgcccccttggcgagacgtagat
gtgaagccagtcgctcccagtgacacgctgattcggcgttcgattagtcagcagaagtca
ggagtgagtatcaccattgatgacccggtccgcacagccaaacaaccctctcctcctcgt
ggcaagctgtcgaacattgtccatgtctgcaacctggtgaggccgtttaccttggggcag
ctgaaggagctgttgaaccgcacagggactttagtggaggaaggtttttggatcgacaag
attaaatctcactgttatgtcacatactcaaatacagaagaggcgatggccactcgcaca
gcattacatggggttaaatggccccagagtaaccctaagttcctcagtgttgacttctgc
acgcaagaggaggtggacttccacaggggtttgggtccagcaggagaaaagccaccagaa
gagccccgtggggcggcagccgctggacctggccgtccggtacccccgcctctcctgcct
gagcgtgaccagtgggcagaacgagagagggaaatggaaaggagggagagatcgcgtgcg
gaaagggaatgggacagagataaggtgagagacttcagcaaacctggagaggagcgggaa
gctggcgccagaagatcacgttcacgagaacgcgagaggcggcgcaaggaaagggggaag
agcaaagagaggaaaaccgataagaaggaaaagggacctgaggagccacccgctaaactg
ctggatgacctcttccgcaaaaccaaagctgctccatgcatatactggctccccctcaca
gaggagcaggcagcacagagggtagcggctcgtgccgagcgcatgagggaaagagagaag
aggtggaaggagatggaagaggaggataagaaacgtgaggaggagcaccgggagaggatg
aagaccagcggggccgccggaggggatggtgagcgagaccgtgacagagaacgagaccga
gacagaggtcgagagagggagcgagagggggataagcggaaggagggatatcgcaggcct
ggtgcaaacagtgcaagcgggagcaggaggtcacgaagccgcagcagccctccacccaga
gatcgacgacgctaa
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integrated database retrieval system
