Chanodichthys erythropterus (predatory carp): 137004143
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Entry
137004143 CDS
T10334
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03030
DNA replication
cery03420
Nucleotide excision repair
cery03430
Mismatch repair
cery03440
Homologous recombination
cery03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137004143 (rpa1)
DNA replication proteins [BR:
cery03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137004143 (rpa1)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137004143 (rpa1)
MMR (mismatch excision repair)
137004143 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
137004143 (rpa1)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
137004143
NCBI-ProteinID:
XP_067220450
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Position
17:complement(18987530..19025067)
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AA seq
602 aa
AA seq
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MTVRLSEGAIESLTKGIEVSNPVLQCVNIRKIDGGNGLSRFRLMMSDGLHTMSSFMLSTQ
LNPMAEQNQLASNCVCMLKRSVTNVLKDGRRVVVILDMEVLKSADQMPGKIGDPTPYVEG
QSKAQQSTAPAPTARPLQPQNGSDGSMNRPPPQSFGKKPMAAPNTPGGSSKVVPIAGLNP
YQSKWTVRARVTNKSAIRTWSNSRGDGKLFSMELVDESGEIRATGFNHEVDKFYSLIEQG
KVYYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPCEDSHDVPMVQCDFVSIADLESRE
KDTIVDVIGVCKNTEDVTRITTKNSREVSKRNIQLMDMSGRVIQLTMWGNDAETFDGSGQ
PILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHAMDGQSMTELRGP
GGGGNTNWKTLAEVKNEHLGHGDKADYFSCIATIVYIRKENCLYQACPSKDCNKKVVDQQ
NGMYRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDSAEILLGQNSSYLGQLKDSN
EAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRKLA
AQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactgttagactgtcagaaggggcaattgagtccctgactaaaggaattgaagtcagc
aaccctgttcttcaatgtgtgaacatccgcaagattgatggtggaaatggcctgtcccgt
ttccgtctcatgatgagtgatgggttgcacactatgtcctcattcatgctctccacacag
ctcaatcccatggctgagcaaaaccagttggcctctaactgtgtgtgtatgctgaaaagg
agcgtcacaaatgttctcaaggatggacgacgtgtggtggttatactggacatggaagta
ctcaagtctgccgaccagatgccaggaaaaattggagacccaactccttatgtggagggt
cagtcaaaggcacaacagagtacagctccagctccaactgcacgtccattacagcctcag
aatggaagtgatggttcaatgaacagacctccccctcagagcttcgggaaaaaacccatg
gctgcccccaacactcctggaggcagctctaaagttgtgcctattgccggcctcaatcct
taccagtcaaagtggactgttagagcccgagtcactaacaagagtgccatccgcacatgg
agtaactccaggggagatgggaagcttttctccatggagcttgtggatgaaagcggtgag
atcagagcaactgggtttaatcatgaggtggacaaattctactccctcatcgagcaggga
aaagtctactacatctccaaaggaaccttgaagatcgctaacaaacagttctcttcactc
aagaatgactacgagatgactctcaacggcgagacaagcatcatcccttgcgaggacagc
catgatgtccccatggtgcagtgtgacttcgtttccattgctgacctggagtccagggag
aaagacaccatcgtagatgtgattggagtatgtaaaaacacagaggatgtgacgcgcatc
acgaccaagaacagtcgtgaggtttccaagaggaacatccaattgatggacatgtctggc
agagtcatccagctcaccatgtggggtaatgatgcagagacatttgatggcagtgggcag
cccatcttggccattaagggggcaagattatctgactttggtgggcgttctctctccact
ctctacagcagcacagtcatgatcaaccccgatattcctgaggcatacaaactgcggggc
tggtatgataaggaaggacatgctatggatggacaatcgatgactgaattgagaggacct
ggtggtggtggaaacacaaactggaagaccctggcagaagtcaagaatgaacacttaggc
catggagacaaagctgattatttctcttgcatcgccaccatcgtctacatccgaaaagag
aactgcttgtatcaggcctgtcccagtaaagactgcaacaagaaggtggtggaccagcag
aatggcatgtaccgctgtgagaaatgcgacaaagagttcccagacttcaaatatcgcctc
atgctctcggccaacattgctgattttggagacaaccaatgggtgacttgttttcaggac
agtgctgagatccttctgggccaaaactcaagttatctcggccaactcaaggactcgaac
gaagctgcatttgatgaggtctttcagcatgcaaacttcaatacgtttgtcttccggaac
cgagtgaagctggagacctacaatgatgaatctcgcattaaagtgacagtggtggatgcc
aagccggtggaccacagagaatacagcaaacggctgatcatcaacataagaaagttggct
gcacagtag
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