KEGG   Chanodichthys erythropterus (predatory carp): 137004200
Entry
137004200         CDS       T10334                                 
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery04382  Cornified envelope formation
cery04510  Focal adhesion
cery04512  ECM-receptor interaction
cery04518  Integrin signaling
cery04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cery00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137004200 (col4a4)
   04518 Integrin signaling
    137004200 (col4a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137004200 (col4a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137004200 (col4a4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137004200 (col4a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cery04147]
    137004200 (col4a4)
   00536 Glycosaminoglycan binding proteins [BR:cery00536]
    137004200 (col4a4)
Exosome [BR:cery04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137004200 (col4a4)
Glycosaminoglycan binding proteins [BR:cery00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137004200 (col4a4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137004200
NCBI-ProteinID: XP_067220496
LinkDB
Position
17:complement(26742689..26816339)
AA seq 1653 aa
MVPAVETSTTPKFLGKVPAGDKTEECGGRDCSVCQCFPPKGERGNPGDLGRQGPQGPPGL
PGIPGLYGEKGQRGLIGFPGDSGPAGDQGVRGVDGHSGIDGVPGHPGPRGLPGLPGKDGC
NGTRGECGLDGEVGRPGLPGPKGLPGLKGIKGDASYRITYFPGTPGVDGSPGITGPQGSR
GFTGPQGLPGRVGPDGQMGVQGLPGPRGPPGDPGRSLPGPKGDEGDQGPKGMPGPFEFVE
PNPEDYIKGDKGNKGQKGICGVPGSMGFEGPPGEKGEKGIIGFTGSRGPIGFPGRKGFQG
PKGKRGDNGLPGLFGNPGTKGFPGDPGPKGEPHYKTTFTTGPHGDPGLPGAAGPPGDRGM
MGIPGPRGDSGVSLMGAMGESGLPGLNGLNGEKGEPGKIYGSPMNYGEPGKPGPPGCKGQ
PGNPGIPGCYCLPGERGEPGEVGQRGPSGLSGVTGRKGYHGLCVCEPPDDLPGDPGPPGR
PGDPGDQGQKGFRGPTGDIGLIGERGVGGVTGPSGFTGVRGIKGEKGGFMMLCIKGDKGD
TGSVGGYGMPGCSGKKGADGKIGAPGDPGPLGDNLAGLPGDRGCQGAAGVKGLRGPSGPP
GPCMMGSIGKRGQQGDPGPQGKTGPPGPKGVQGDQLPCEPGIPGAPGFRGMPGCKGNKGT
LGNPGCVGQTGPDGPKGENGDPGDCGFSGLKGPDGCLGDPGDTGPDGNSINGSPGIPGSC
GPQGLKGSPGDCVMGAPGLKGPCGVQGRQGPKGVPGPCGPIGLQGTSGIPGLPGRKGEKG
EDGKPGAPGCPGGRPELCDKGQAGPPGRTGPPGFIGPRGNPGEKGSPGELGPSGVGAKGC
PGKPGMPGIQGCTGLQGPSGLEGDCGNSGSAGPKGLPGLPGQDGCPGNRGHTGPSGAPGP
KGLRGLNGCPGFPGVNGTKGQKGCRGPRGPPGDMISVPVKGQVGPPGPQGENGFCGERGN
KGDPGPPGPPGYPGRNGPPGFESGSCGPPGVPGVSGEPGERGQPGPRGIDGFPGDCGDPG
DPGLTGLAGTPGFPGFDGPKGEKGQSIGEPGRTGERGPSGEKGVSAPPGEKGDQGDLGPQ
GPNGNCGPPGPPGNTGPHGPPGVVGPPGPCGRYGPEGRQGPPGPPGPKGNPGCPGLRGPQ
GIPGIHGLDGLKGVKGEIGSRGLGLIGNRGNLGLPGDKGDPGDPGLCGPSQNGVRGPKGQ
LGCQGDPGPVGPPGFRGEECKILKPGPCGKQGCRGPDGPPGPMGEMGESGSVFTVRGEFG
CPGDPGSPGCKGEKGCSGPNGLPGYPGPEGPKGERGPSGLMGLPGLSGPKGDCGPPGPCG
EKGEKGDTGPKGEPGDVISIDHGPAPQGPPGAPGPPGPVGEDGENGPNGSEGLKGEKGPN
GADGFPGPRGPAGPDGPLGDRGDIGLRGPPGSQGPPGPRGDPGIESSSSGILLVRHSQSD
TVPTCPLGLTQVWTGYSLLYLEGQERAHTQDLGQAGSCVPMFSTMPFSCCNMNSCNYASR
NDKSYWLSTTASIPMMPMKGMEIQPHISRCVVCEAPSPAIAVHSQDLSIPPCPPKWTSLW
QGYSFIMYTGAGDEGGGQSLTSTGSCLEDFRSLPFVECQGSLGTCKYFATIYSFWLTTVD
KQGFNTNPHNTVLENEQEQRDSVSRCNVCMKTD
NT seq 4962 nt   +upstreamnt  +downstreamnt
atggttcctgcggtcgaaacgagtaccaccccaaagttcctggggaaagttcctgcgggg
gacaagacagaagagtgtggaggtcgagactgcagcgtctgccagtgtttccccccgaaa
ggagagaggggaaatcctggcgacttaggtcggcagggtccccaggggcccccaggtttg
cctggcatcccaggactttatggcgagaagggtcaacgtggactcataggattccctggg
gattctggcccggcaggagaccagggtgttcgaggagttgatggccatagtggaatagat
ggagtgcctggtcatccagggcctcgtggtcttcctgggcttccagggaaggatggctgt
aatggaaccagaggggaatgtgggttggatggtgaggtaggacgacctggcctcccagga
cccaagggactacctgggttaaaaggtatcaaaggagacgcctcttataggataacttac
tttcctggaactcctggtgttgatggatcaccaggaataactggaccacaaggatcgaga
ggattcactggcccacaaggtctaccaggacgagtgggacctgatggacaaatgggcgtt
cagggtttaccaggtccaagaggcccaccaggagacccaggaagatcactgcctggacca
aaaggagatgagggggatcaaggtcctaaggggatgccaggtccatttgaatttgtagag
cccaacccagaagactatataaaaggcgataaaggaaataagggacaaaagggaatttgt
ggagttcctggctcaatgggttttgaaggacctccaggagaaaaaggagagaaaggcata
attgggttcactggatccagaggcccaattggatttccaggccgaaaagggtttcaaggt
cctaaggggaaacgtggggataatggtctccctggtctatttggtaatcctggaacaaag
ggcttcccaggtgaccctggacctaaaggagagccacactacaaaactacatttacgaca
ggaccacatggagatcctgggctccctggtgctgctggaccacctggggatagagggatg
atgggtatacctggtccccgtggtgattcaggagtatctctaatgggtgcaatgggtgaa
tctggtctccctggtctcaatggactcaatggagaaaagggtgaaccaggaaaaatatat
gggtcacccatgaactatggggaacccggaaaaccgggccctcctggatgtaaaggacaa
ccaggaaatcctggcattcctggttgctattgccttcctggtgaacgtggagaacctgga
gaggttggacagagagggccttccggattatcaggtgtcacggggagaaaaggttatcat
gggttatgtgtatgtgagccacctgatgatctacctggtgatcctggccctccaggccgt
ccgggtgaccctggtgatcaggggcaaaaagggtttcggggtcccactggtgatatcgga
ctcatcggagagaggggtgtggggggtgttactggtcccagtggcttcacaggtgtcaga
gggattaaaggagagaaaggaggttttatgatgttatgcataaagggggataaaggtgac
acaggatctgttggaggatatggaatgccagggtgcagtgggaagaaaggggctgatggg
aagattggtgctcctggagatccaggacctctgggagataatcttgctggactgccaggt
gacagggggtgtcaaggagctgctggtgtgaaaggcctcagaggtccatctggtcctcct
ggaccatgtatgatgggatcaattgggaaacgagggcaacaaggggaccctggacctcaa
ggcaaaacagggccccctggtcctaaaggggttcaaggtgatcaactgccctgtgagcct
ggtatacctggagcccctggttttagaggaatgcctggatgtaaaggtaataaaggtaca
ctcggaaatccaggatgcgtaggacaaactggaccagatggtcccaagggagagaacgga
gaccctggagattgtgggtttagtggactgaaaggtccagatggatgtttaggagatcca
ggagacactggccctgacggcaacagtattaacggctcacctggcatacctggaagttgt
ggaccccagggtctgaaggggtctccaggagactgtgttatgggggctccaggactgaag
gggccctgtggggttcagggacgtcagggccctaaaggtgtacctggaccttgtgggcca
attggattgcaaggtacatctggtattcctggacttcctggaagaaaaggggaaaaagga
gaggatggtaaaccaggagcacctggttgtcctggcgggagaccggaactatgtgataaa
ggacaagctggtccacctggcaggacaggaccaccaggctttattggaccgagaggcaat
cctggagagaaaggatcacctggggagctgggaccttcaggcgttggagctaaaggatgc
cctggtaagcctggtatgccgggcattcaaggatgcacaggccttcagggaccttcagga
ctagaaggagactgtggaaattcaggatctgctggaccgaagggtttacctggacttcct
ggtcaagatggctgtcctggcaacagagggcacacaggcccttcaggggctcctgggcca
aaaggccttaggggtctcaatggatgtccaggtttcccaggggtaaatggaaccaagggc
cagaaaggatgccgtgggcctcgtggacctccaggagacatgatttccgtgccagtcaaa
ggccaggtagggccacctggacctcaaggggagaatggtttctgtggagaaaggggtaat
aagggtgatccgggtccgcctggaccgccagggtatccaggacgtaatggacctcctggc
tttgaaagtggctcttgtggaccgccaggcgttcctggggtgtctggcgagcctggcgaa
cgtggccaacctggaccaaggggaattgatggattcccaggggattgtggtgatccaggt
gatcctggacttactggtttggcaggaacccctggtttccctgggtttgatggtcctaaa
ggtgaaaaaggtcaatctattggtgagccaggacgaacgggtgagagagggccaagtgga
gaaaaaggcgtgtcagctccccctggtgagaaaggagaccagggtgaccttggcccacaa
gggccaaatggaaactgtggtccaccaggcccacctgggaacactggtccacatggacct
cctggagtggttgggccccccggtccgtgtggaagatatggtccagagggtcgtcaaggg
cctccaggtccacctggccctaaaggaaaccctggatgccctggccttagaggacctcaa
ggaatcccagggattcatggactagatggcctgaagggtgtcaagggtgagattggatct
cgagggctgggtttaataggtaatagaggtaatctaggactgcccggagacaagggtgat
ccgggagacccagggttgtgtggcccatcacaaaatggtgttcgaggtccaaaaggacag
cttggctgtcaaggggaccctggtccagtgggtcctccaggatttcgtggtgaagaatgt
aagattcttaaacctggaccttgtggaaaacagggttgccgtgggccagatggacctcca
gggcccatgggagagatgggagaatcaggcagtgtcttcacagtgcgtggtgaatttggt
tgcccaggtgatccaggatcaccaggatgtaaaggagaaaaaggatgcagtgggcccaat
ggcctgccagggtatccgggcccagaaggtccaaaaggtgaaagaggaccatctgggctt
atgggccttccggggctctctggccccaagggtgattgtggacccccaggaccctgtggt
gaaaaaggagagaaaggggatacaggtccaaaaggagagcctggggatgtcataagtatt
gatcatggcccagctccccagggccctcctggtgctcctggtccacctggcccagttggt
gaagatggagagaatggacctaatggcagtgagggactgaaaggtgaaaagggaccaaat
ggagctgatgggttccctggacctcgtgggccagcaggaccagacggaccattaggagac
cgtggagatataggcctaagaggaccaccaggctctcagggacccccaggaccacgtggt
gatcctggaattgagagctcttcctctggtatccttttggtgaggcacagtcagtctgac
actgtgcccacttgtcccctgggcctaacacaggtgtggaccggctacagcctgttatat
ctggagggtcaggagagagcacacacacaagacctgggccaggcaggttcatgtgtaccg
atgttcagcaccatgccgttctcctgctgtaatatgaactcctgtaattatgccagccgc
aatgacaaatcctactggctgtctacaactgcttcgattccaatgatgcctatgaaagga
atggaaattcagccacacatcagcaggtgtgtggtgtgtgaggctccatcgccagccatt
gctgtacacagtcaagacttgtctataccaccatgtccacccaaatggacaagcctctgg
caaggatattcattcattatgtatacaggagcaggggacgagggaggtggacaatctctg
acgtcaacaggaagctgcttagaggacttccgcagtctgccattcgtggagtgccaaggt
tcgcttggcacatgcaagtatttcgccactatctacagtttctggctgactacagtggac
aagcagggctttaacaccaatcctcacaatactgtgcttgagaacgaacaggagcagcgt
gacagcgtcagcagatgcaacgtctgcatgaagacagattga

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