Chanodichthys erythropterus (predatory carp): 137004408
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Entry
137004408 CDS
T10334
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
cery04140
Autophagy - animal
cery04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137004408 (hif1al)
04137 Mitophagy - animal
137004408 (hif1al)
04148 Efferocytosis
137004408 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137004408 (hif1al)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137004408 (hif1al)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
TLP-20
FAM176
Motif
Other DBs
NCBI-GeneID:
137004408
NCBI-ProteinID:
XP_067220797
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Position
17:complement(18282341..18297843)
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AA seq
650 aa
AA seq
DB search
MEAGFRHQKKKYLKKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRITSHLDK
AAIMRVTLSYLRMNRLIQSVGPTKTKTEETENPTDGFYQQALAGFILVMTEEGDMIFLSE
SVSKYIGITQLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKLAEHNFFLRMKST
LTHTGRTVNIKSANWKVLHCTGHMQTFSGDDETSLPAGSFLTLLCEPIPHPSSVEFPLDS
STFLTRHSMDLTFTQCDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQ
VCTSHYRFLAKNGGFIWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCQ
KPKPKAEKLSVLEKVEEEEEEKEEEEEEDSDMEESSTAKLFLQMKENPEELLQLAPHSGD
AIISLTEGVELSFCRPSSPNSVPECPQDLCTPELRQLLSPIFDRPTKSPPAASPAEELPM
EMEGVEKFFALKPEESVTLKGQSEAMDEIDLDMLAPYISMDDDFQLTFLPQSEMAASSEM
LTNSSRKRCLEDDEEDDIPVLAAKWERKQMSSSIEEQLLLSHTLLNGLSDDASEEFEPPP
QKRCQLLTDRDPLLGGAQALCDTAALMKDTFLSRPPDLMRPVAETMSSLT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggttttcgccaccaaaaaaaaaaatacttaaaaaaaaggcccagtttggaa
cagcggaaggtgcgttctcgtgacgcggcacgctgtaggaggagtcaggagactgaggtg
ttttacgagctggcgcactcgctaccccttccacggcgcatcacctcccacctggacaaa
gctgccatcatgagggtgacgctcagctatctgcgcatgaaccgcttgatccaatctgtg
ggtccaaccaaaacaaagactgaggaaacggagaatcccactgatggcttttatcagcag
gcactggctggctttattctggtgatgactgaggaaggggacatgattttcctctcagag
agtgtcagcaaatacatcggcataacacagctggagctgcttggacagagtgtgtatgag
tttgttcatccctgtgaccaagaagaattgcgagacatcctcaccacaagaccaggtatt
tcaaagaaaaagacagagaagttggcagaacataattttttccttcggatgaagagcaca
ctcacccacacaggaagaacagttaatatcaagtctgcaaactggaaggtccttcattgc
acaggacacatgcagacgttcagcggtgatgacgagacctcgctccctgctggcagcttc
ctgacattgctgtgtgagccaattcctcacccctccagcgttgaattcccacttgacagc
agcactttcctcacacgccatagcatggacctgactttcacacaatgcgacggacgagtc
actgagcttgttggataccaacctgatgatctgattggccggtctgcctatgagttttat
cacgcccttgattttgatcatgtgaccaggagtttacacatcttgttctccaagggccaa
gtgtgcaccagccattaccgcttcctggctaagaatggaggatttatctggactgagact
caagccactgtcctctacaacagcaggacttctcaacccgaggctgtggtctgcctcaac
tttatcctcagtggcgtggaagaggcagatgttgtgttctcgttggaacagacttgtcag
aaaccaaaacccaaagcagagaagctaagtgtgctggagaaggtggaggaggaggaggag
gagaaggaagaggaggaagaagaggactcagacatggaggagagcagcactgcgaagctc
ttcctccagatgaaggagaacccagaggagttgctgcagctggcacctcactctggagac
gctatcatttccctaacagagggtgtggagttgtccttctgccgtccatctagtcccaac
agtgtcccagaatgccctcaggacctctgtacgcctgaactccgccagctcctttctcca
atattcgacagacccaccaaatctccacctgctgcgagccctgctgaagagctgcccatg
gagatggaaggggtagagaagttcttcgccctcaaacctgaagagagtgtaactctgaaa
ggacagtcagaggctatggatgagattgatttggacatgctagctccatatatctccatg
gatgatgacttccagttgaccttcctgccccagagtgaaatggctgcatcttcagaaatg
ctaaccaactcttcaaggaaacgatgtttagaagatgatgaggaggatgacattcctgtt
ctggctgccaaatgggagaggaaacagatgagcagctccatagaggaacagcttctgctc
agccacacattactgaatggcttgtccgacgatgcttcggaagaatttgaaccaccacct
caaaagcgatgtcagcttttgaccgacagggacccgttactgggcggagcgcaggcgtta
tgtgatacagcagctctcatgaaggacaccttcctatcacgcccacctgacttaatgcga
cctgttgctgaaaccatgtcgtcccttacttga
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integrated database retrieval system
