Chanodichthys erythropterus (predatory carp): 137004445
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Entry
137004445 CDS
T10334
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137004445
Spliceosome [BR:
cery03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137004445
Complex B
137004445
Complex C
U2 SnRNP specific factors
137004445
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GFIT
Other DBs
NCBI-GeneID:
137004445
NCBI-ProteinID:
XP_067220877
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Position
3:complement(36059460..36064946)
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AA seq
742 aa
AA seq
DB search
MSQGRPCIPFRKAHPYSVIPSEEEEEVDYDSDGNPIAPTTKKIILPLPPIDHSEIDYPPF
EKNFYIEHEELSSLTGAGVVELRQKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEY
TQPTPIQCQGVPISLSGRDMIGIAKTGSGKTVAFIWPMLVHIMDQKELEPGEGPIAVIVC
PTRELCQQIHAECKRFGKVYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK
KATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDIM
IDPIRVVQGDIGEANEDVTQIVEVLLSGKEKWGWLTRRLVEFTSAGSVLVFVTKKANCEE
LATNLNQEGYSLGLLHGDMDQSERNKVIADFKKKNLPILVATDVAARGLDIPSIRTVVNY
DVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGDLVRNLEGANQSVSKDLMDLAM
QNPWFRKSRFKGGKGKKINIGGGGLGYRERPGLGSESTERSSSGGAALGNYEAYKPSTGA
MGDRMSALKQAFQAQYKNHFVAASGVPPKLTTKSSSSSGWTSAGSLSSLPSGAPEGPDRP
HLPYSPTSSSSFSSMAPPPALSSGTKMSGFSSAGSLSSVSDSYSSSSSKEGSRSDRNADD
RGRHGDSHYRHGDRHSGVDRDRYGERDRYSDRDRHGDSRNGEGSHRDREGRSERDGGERS
GTHKDSFAVPDPPKRKKSRWDN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggaagaccatgcattccattcagaaaggctcatccctattccgtaatccct
tcagaggaggaggaagaagtggattatgacagcgatgggaatcccattgctcctactacc
aaaaagattatcttgcccctgccccctatagatcactcagagatcgactatcctcccttt
gagaagaacttctatattgagcatgaggaactcagcagtctgactggggctggagtggtg
gaactgagacagaaactcaacctgaaggtttcaggtgcagcccctcctaagccagctacc
agttttgcccactttggatttgatgaacagcttatgcaccagatccgtaaatccgagtac
actcaacccacacccatccagtgccagggtgttcccatatctttgagtggtagagacatg
attggcattgccaaaaccggcagcggaaagacggtagcttttatttggccaatgctggtg
cacatcatggaccagaaggagctggagccgggagaaggacccattgctgtgattgtctgc
cccaccagagagctgtgtcaacagatccatgccgagtgcaagcgcttcgggaaggtatat
ggcctccgctcagtggcagtgtatggaggcggcagcatgtgggaacaagccaaagctcta
caggaaggggctgaaattgttgtctgcaccccgggtcgtctgatcgatcatgtgaagaag
aaagctacatctctgcagcgagtgacctacctggtatttgatgaagctgatcgcatgttt
gatatgggctttgaataccaagtgagatccattgccagccacgtcagacctgatcgacag
actctcttattcagtgcaacatttcggaagaaaattgaaaagctggcacgagatattatg
atcgaccccatccgtgttgtgcagggtgacataggagaggctaatgaagatgtcactcag
atagtggaggtactgctgtctgggaaagagaagtggggttggctgacgcgcaggctggtg
gagtttacctccgctggctcagtgctggtctttgtcactaaaaaggctaactgcgaggag
ctggctacaaatttgaatcaggaaggttatagcctgggactgctccatggagacatggat
cagagtgagaggaacaaagtaattgctgactttaagaagaagaatctgcccatattggta
gctactgatgttgctgctcgcgggttggatattccatctatccgtacagtcgtgaactac
gacgtagcacgagacattgacacacacacacatcgaattggtagaacaggtcgtgcagga
gagaaaggtgtagcttacaccctgctcaccactaaagacacttcatttgctggtgacctg
gttcgcaatttagagggagccaatcagagtgtttcaaaggacctgatggacctggcaatg
cagaatccctggttcaggaaatcccgctttaagggtgggaaagggaagaagataaatatt
ggaggtggaggcctgggttacagggagagacctggccttggatctgaatctactgagcgc
agtagtagtggcggtgctgctcttggtaactatgaggcctacaaaccctcaactggagcc
atgggagaccgtatgtctgccctgaagcaagcatttcaggctcagtataaaaaccacttt
gtggcggcatctggtgttccacctaaacttaccacaaagtccagcagctcttctgggtgg
accagtgcaggaagtctaagctctttgccttcaggagcacctgaggggcctgacagaccc
cacctgccctactcgccaacgtcctcttcctcattttcctccatggcgccgccccctgcc
ctcagctcaggcaccaaaatgagtggcttcagtagcgcgggctccctgagctcagtttca
gactcttactctagctcttcttcaaaagaggggtcccgtagcgataggaatgctgacgac
aggggtcgtcatggagatagtcattatcgtcatggtgataggcatagtggggtagaccgt
gatcgctacggggaaagggaccgctacagtgacagagatcgtcatggcgatagccgaaac
ggtgaagggagccatagggacagagagggacggtcagaacgagatggaggggaaaggtca
gggactcataaggacagctttgcagttcctgatccccccaaacgtaagaaaagcagatgg
gataattaa
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