Chanodichthys erythropterus (predatory carp): 137004484
Help
Entry
137004484 CDS
T10334
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
cery04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137004484 (rabgef1l)
04137 Mitophagy - animal
137004484 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137004484 (rabgef1l)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137004484 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
137004484 (rabgef1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
137004484
NCBI-ProteinID:
XP_067220951
LinkDB
All DBs
Position
17
Genome browser
AA seq
489 aa
AA seq
DB search
MNSQAVRRGFSVQQSDLMCKRGCGFYGNAVWQGHCSKCWREQNQCTRAKQIEEDRALAER
LQREEEAAYASSQEGAQSRPASSRTNSVPMVKRLFTPAPKTPARRDAGSSQTSVGQSSSL
SRQPSAETDHVTQHFIDFLKTFQRPGYEIFKQCHAFTENIARKKVAVCDDLSDSVQDFYQ
NMSEYLQTNFKGSPDVMETVMEEVERYVMGRLYEQLFCPEHTDDEKKDLVVQKRIRALHW
VSIAMLCVPVDEQIPKVSDSVERAITDLIDLDSKKVPKEKLACVTRCSKHIMTAIQGSKK
AAASADDFLPSLVYIVLKANPPRLHSNIQYITRYCNPSRLMSGEDGYYFTNLCCAVAFIE
KLDAQSLNLSQEDFELYMSGAASPLGPKASSSGHSSQSGSRAVASSTTVPPPDQRKDLPS
GVRQERRAEEPQALEADLIEWKEGQELSVLGILEAAPVRTRTSATFTIDSDNIGSDSLPP
PLQPQKFAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcaggcggtgcgcaggggcttcagcgtccagcagtccgacctcatgtgtaag
aggggatgcggtttctatggtaacgccgtctggcagggccactgctccaaatgctggcga
gagcagaaccagtgtacgagagccaagcagatcgaggaggaccgggccctggccgagagg
ttacagagagaggaggaagccgcctatgccagcagtcaggagggggcgcaatctcgaccc
gcatcctccaggacaaacagcgttcccatggtgaagaggctcttcacccccgctcccaaa
acacccgcacggagagatgcaggatcttcacagacgtccgtgggccagagctcgtccctc
agccgacagcccagcgcagagactgaccacgtcacgcagcacttcatcgacttcctcaag
accttccagagacctggatatgagatcttcaaacagtgccacgccttcactgagaatatc
gctcgcaaaaaggttgctgtttgtgacgatctctcagactctgtgcaggatttctatcaa
aacatgtctgaatatcttcagaccaactttaaaggctctccagatgtgatggagactgtg
atggaggaggtggagcgctatgtgatgggccgtctgtatgagcagctcttctgcccggag
cacacagacgacgagaagaaggacctggtcgtccagaagagaatcagggccttgcactgg
gtgtccattgcgatgctgtgtgtcccagtggacgagcagatccctaaagtatcggacagc
gtggagagagccataacagatctgatcgacttggactctaaaaaggttcctaaggagaag
ctggcatgcgtcaccaggtgtagtaaacacatcatgactgccatccagggcagtaagaaa
gctgccgcctcagcagacgacttcctgccctctctcgtctatatagtactgaaggccaat
ccgccccgattacactccaacatccagtacatcacccgctactgcaaccccagccgcctc
atgagtggagaggacggatattacttcactaacctatgctgtgccgtggcgttcatcgag
aagctggatgcgcagtcgctgaacctgagccaggaggactttgagctctacatgtctggt
gcggcgtctccattgggccccaaggcctcttcctccggccacagctcccagagcggctct
agagcggtagcgagcagcacgaccgtcccgccgccggaccagaggaaggacctgccgtca
ggtgttcgacaggaacggagagcagaggagccccaagctctggaggctgacctcatcgaa
tggaaggaagggcaggaactctctgtactgggcattttggaagcggctcctgtacggaca
cgcacctctgccaccttcaccatcgactcggacaacattggcagcgacagcctgcctcct
ccgttacagccgcagaagtttgctagctag
DBGET
integrated database retrieval system
