Chanodichthys erythropterus (predatory carp): 137004506
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Entry
137004506 CDS
T10334
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04270
Vascular smooth muscle contraction
cery04625
C-type lectin receptor signaling pathway
cery04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
137004506 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137004506 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
137004506 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137004506 (arhgef12a)
Membrane trafficking [BR:
cery04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
137004506 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
137004506
NCBI-ProteinID:
XP_067220992
LinkDB
All DBs
Position
17:16186051..16247765
Genome browser
AA seq
1396 aa
AA seq
DB search
MSDTRSTVTDRTSSILSRDHPPDKRPKSDKLPGTPTHEFDPTDVLVQKSGFVVADRRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVNLIKSGSYVALTVLGRPPGLPQIPLSEVNVGLGSPGCFGDPFITSPNSYNAVER
TSSPLVPWEENSASHNQRLDNKRMVSKEQQDMQGLREDYSRTPTAKPLRDIQEAKKHIPH
QQGQLNRATHEGLCLRNSEDGCWVDENQYKGDFSPEGFWSGSSVSAVQRQFYPASPESQR
DSNCSSPKSTPRDSLNSCPSPEVEDGSDLDSRFQSSIGSPPSRLASEIIAAEDDDFDTEQ
EQVNGQCSCFQNIELLKTRPAHLAAFLHHVISQFDPAPLLCYLYADLYKQTNSKEMRRIF
MDFLTFFIDRGANLKVAVPESISTELERRRPELIPEELHRQYIQTMQEMLLPDVQRNLED
FRQKRSMGLTLADVELSRLDSEQLAVERERSCAENILSKIDDILSTSQPTEEEKCTTIQY
VIFMYMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEEKLKRPRFPIRVPPRWP
SRIDSVPSGRAGDNIKQRPQKQMSQPSMGGSDLIEGGRLRGSQSSEGSDLLQSPGLITSP
PFSASYSSPTDPSLRDPEFNMSPSAVVPRLSDGVQSGDVLDSIYPPCDYIAYNMDQLDED
RDGDRLLDVGTPKLSRRFEELQSEDDQGSDVYSDVDPPNWQQLVGRDVLAGLTPHEIKRQ
EVINELFYTERAHVRMLKVLDSVFYKKLTRENILPSADIKNIFTNLDEIIQLHMRIADQM
TAIRKKNELSVIDHIGDELLSWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRFT
SFMQEAESNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIAKYTDESEEKDKVRRAAECCRQ
ILNHVNQSVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWK
INKDKTIELYTLLLEDILVLLQKQDERLILRCHSKNLAGTADTKHIFSPIIKLSTVLVRS
VATDNRSFFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRAEVMNAKPHSIIPLPQHDG
DRDGVELSKFSKGSERISTGSIQSAEKDSEFSPSAALRDCVPDSNPGEEEQVPRAGRDGS
YLDSELLNGRDADSLSCSSKADEALKTLAALKQVLVTQLMAQDEGERLGRSAGSRLLRTT
SLRTPVEHSSARTPSRAQDYTSGDTGFYECPEDYAAYLVLEGYGGSGESSTDDDIQVGRK
EPSLAHSCAADSGISLKFSSPSSGSTSRLSRQVLSHLRCLQANLNHLKEMETKYYNLLRQ
RPVGSSADGDESRDKK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccacagtcactgacagaaccagtagcattctcagcagagaccac
cctcccgacaagaggcccaaaagcgataagctgcccggtaccccaacgcatgagtttgac
ccaacagatgtgctggtgcagaagagtggatttgtagtggctgacaggagacctgagtct
tgtgggctggttcagagatgcgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgttttcgtgcaactcgtcaaacaggatggagctgccatgcgt
gcaggtgttcagacgggggacaggattattaaggtgaatgggaccttggtgacacaatca
aaccatgtggaagtggtaaatttaatcaaatccggttcatatgtggccctcacagtatta
ggccggcctccggggttgccccagatccccctctctgaggtaaatgtggggctcgggtca
ccggggtgtttcggggacccttttattacatctcccaattcttacaatgcagtggaacgc
acctcctctcctcttgtaccatgggaagagaacagtgcttcacacaaccaaagattggac
aacaagaggatggtgtccaaggagcaacaggacatgcagggactaagggaggactacagc
agaactcctacagccaaaccactacgggacatccaggaagccaagaagcacattccacat
cagcagggccagctcaacagggctacacatgagggtctgtgtctcaggaacagtgaagat
ggctgttgggtggatgagaatcaatataagggagatttcagcccggagggtttctggagt
ggaagttcagtatcagctgttcagcgccagttctatccggcctctccagagagccaaagg
gactccaactgttccagtccgaagagcacccctagagacagcctcaactcctgcccatcc
cctgaggtcgaggatggctctgacctggattctcgtttccaatcctccatagggagccca
ccctcccgcctggcttcagaaatcattgctgctgaagatgatgactttgacacagagcag
gagcaggtgaatggccagtgcagctgcttccagaatattgagctcctcaagactcgcccc
gctcatcttgctgctttcctgcaccatgtgatctcccagtttgaccctgcgcctctgctc
tgctacctgtacgctgacctctacaaacagaccaactccaaagaaatgcggcgcatcttc
atggacttcttgacgttcttcatagaccggggggcaaatttgaaggtcgctgtgcctgaa
tctatctccactgagctcgagcggcggagaccagaactgattcctgaggaattacacagg
cagtatatacagacaatgcaggaaatgctccttcctgatgttcagagaaacttggaggac
ttcaggcagaagcgcagtatgggtttgaccctggctgatgtagaactgtctcgcctggac
tctgaacagctggctgtagagagagagagatcctgtgctgaaaacatcctctccaagata
gatgacattctgtcgacttcacaacccacagaagaggagaaatgcaccacgatacagtat
gtgatcttcatgtacatgaagcatctgggagtgcgggtgaaagagcaacgaaacctggag
tccaaacgagttcgaattaatttccttccttccaaactgaggaaaagcaaaacagaaaag
gaaggggaggagaaactgaaaagacctcgcttccccatccgggttcccccgcggtggccc
agtcgcatcgattcagtaccgtctgggagggccggggacaacatcaagcaaaggcctcag
aagcagatgtctcagccatcgatgggcgggtcagacctgatagagggtggacgtttgcgg
ggcagtcagtcgagtgagggctcagacctcttacagagcccaggactgatcacctctccc
cccttcagcgcctcttatagctcaccaacagacccctctctcagggacccagagtttaat
atgagcccatctgcagtggttccccggctcagtgatggggtgcagtcaggagatgtgctg
gacagcatctacccgccctgtgactacatcgcatacaacatggaccagctagatgaagac
agagatggagacagactccttgatgtgggcacacctaaactcagtagaaggtttgaggag
ctgcagagtgaggatgatcaggggagtgatgtttactctgatgtagatcctcccaactgg
cagcagctggtcgggcgtgatgttttagctggcctgacaccccatgagatcaagagacaa
gaagtcattaatgaactgttctacacggagcgagcccatgtacgcatgttgaaggtccta
gacagtgtcttctacaagaaactcacccgagaaaacatactgccctctgctgacatcaag
aacatattcaccaacctggacgaaatcatccaattgcacatgcggatagcggatcaaatg
acagcgatacgcaagaagaacgagttgtcggtcatcgaccacataggagatgagttgctg
tcttggttcagtggtggagaagaggaaaagatcaagcaagcagtgggcactttctgcagt
aaccagcccttcgccctggagctcatcaaatcccggcagaagaaggaccaacgtttcacc
tccttcatgcaggaggctgaaagcaatcggctgtgtcgacgactacagctaaaggacatc
atccctgcagagatgcagaggttcacaaagtaccccctattgatggacaacattgccaag
tacacagatgagtcagaggagaaagacaaagtgagacgagctgccgaatgctgtcgacaa
attctcaaccacgtcaaccagtctgtgaaggagtccgagaataaacagagactggaagac
taccagagacggctggacctctcttccctcaagcaaagcgagaaccccatgatctcagag
tttaagaatctggatctcactaaaagaaagatggtccatgagggtcctctgtcctggaag
attaacaaagacaaaactattgagctatatactttactcctggaagacatcctggtgctg
ctgcagaagcaggacgagcgtcttattctcaggtgtcacagtaagaacctcgcaggaaca
gctgacacgaaacacatattcagtcccatcatcaagctcagcactgtgctggtgcgctcg
gtggcgacagataacagatcattttttgtgatctccatgtccaaaaatggagctcagatc
tatgagctgatggcccaaacagtgtccgagcagagaatgtggcaacgacagatcgctcag
agggcagaagttatgaacgcaaaaccccacagcatcattcctttgcctcagcacgatggc
gacagagacggtgtcgagttaagcaagttcagcaaaggctctgaacggatctccacagga
agcatccagtccgcagagaaagacagtgaattttcgccctcggcagccctgcgggactgt
gtcccagactccaaccctggggaagaggaacaggtcccgagagctggaagggatggctcg
tatctggactccgaactcttgaacggcagggacgcagactctctatcctgttcatctaaa
gcagatgaggcccttaaaacattggcggcgctgaagcaggtgttggtgactcagctgatg
gctcaggatgagggtgagcgattgggccgatcggccggcagtcgtctcctcaggaccacc
tctctacgcacaccggtggagcacagctctgctcgcacccccagtcgagctcaggactac
acttctggagatacgggcttctacgagtgcccagaagactacgcagcctacctggttctg
gaggggtacggcggctcgggcgagagcagtacagatgacgatattcaggtcgggagaaag
gagccgagtttggcacacagctgtgctgccgactcgggcatcagcctgaagttctcctcg
ccctcctcaggcagcacgtctcgcctcagcagacaggtcctctcacatcttcgctgcctg
caggccaacctcaaccacctcaaggagatggaaacaaagtattataatctacttcgccaa
aggcctgttgggtcatccgcagatggcgacgagagtagagataagaaatag
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