Chanodichthys erythropterus (predatory carp): 137004581
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Entry
137004581 CDS
T10334
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04136
Autophagy - other
cery04140
Autophagy - animal
cery04145
Phagocytosis
cery04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137004581 (atg16l1)
04140 Autophagy - animal
137004581 (atg16l1)
04136 Autophagy - other
137004581 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
137004581 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137004581 (atg16l1)
03029 Mitochondrial biogenesis [BR:
cery03029
]
137004581 (atg16l1)
Membrane trafficking [BR:
cery04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
137004581 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
137004581 (atg16l1)
Mitochondrial biogenesis [BR:
cery03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137004581 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
ATG16
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_EIPR1
CFAP251_N
Beta-prop_NWD2_C
eIF2A
Beta-prop_ACSF4
Tricorn_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR41
Ge1_WD40
Beta-prop_WDR19_1st
KASH_CCD
Beta-prop_SPT8
Beta-prop_DCAF12
DUF6049
Uso1_p115_C
DUF7491
FKBP15
PUMA_CC
NET2A
TMA17_helical
DUF6212
Cytochrom_D1
CLIP1
Leu_zip
Phage_PBS1_ring
PspA_IM30
Lectin_N
Motif
Other DBs
NCBI-GeneID:
137004581
NCBI-ProteinID:
XP_067221142
LinkDB
All DBs
Position
17
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AA seq
624 aa
AA seq
DB search
MAGRGVECLWKRHVVDQLKQRDRVQRQAFEEIIHQYNRLLERSDLQVVFSERLQTDKYEH
QNRHDLSPGADGGRSDSLQQEMAQMRIKHQEELTELHKKRGELAQNVIELNNQIQQKDKE
IQSNEAKMLEYQQQISRLEGECRDLRNSLADLERANQTLRDEYDALQITFGALEEKLRKT
TEDNQELVTRWMAEKAQEANRLNAENEKDTRRRQAKLQKELADAAKEPLPIDPDDDIEVL
SEDAGKGTGETSPSRPLSRTSSRRVSQPPAPPPPGGLLDSISNIFGLSDSVQPGFVPSDS
RRRRSVNSFSTSPEAAEVPSACADVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMD
RRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
LTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVM
SGHFDKKVRFWDIRAETIVNELELLGRVTSLDLNQDRTELLTCSRDDLVKIIDLRSNAVR
QTFNAQGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKTLDKGHSSAINSV
SWSPSGAYVASVEKGSKAVLWSDM
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgtggagtcgagtgtttgtggaaacgtcacgttgtggatcagctgaaacag
agagacagagttcagcgtcaggccttcgaggagatcatacatcagtataaccggttgctg
gagaggtctgatctgcaggttgttttttctgaacgtctccagaccgacaagtatgagcat
caaaacagacacgacctcagtccgggcgctgacggcggccgcagtgactccctgcagcag
gaaatggctcagatgagaatcaaacatcaagaggagctgacggagctgcacaagaagcga
ggcgagttggctcagaatgtgatcgaactgaacaaccagattcagcagaaagacaaagag
atccagagtaatgaagccaagatgttggagtatcagcagcagatctcccgtctggaaggg
gagtgccgtgaccttcggaacagtctggctgatttggaacgagccaatcagacgctgcga
gacgagtacgatgccctgcagatcacgttcggcgctctggaggagaaactgcggaaaacc
acggaggacaatcaggagctggtgacgcgctggatggcggagaaagcccaggaggccaac
agactcaacgctgagaacgagaaggacaccaggcgcagacaggcgaagcttcagaaggaa
ttggcggacgcagcgaaggaacctcttcccatagacccagatgatgacattgaagttctc
tcagaggatgctgggaagggaacgggtgaaacgtcaccgagcagaccgctcagccgcaca
tccagtagacgagtgtctcagcctcctgctcctcctcctcctggcggactgctggactcc
atctctaatatatttggcttgtctgattctgtccaacctggtttcgtcccgtctgactcc
agaaggcgtcgttccgtgaattccttcagcacgtctcctgaagccgcagaagtgccgtcg
gcgtgcgctgatgtcagagttccctccactgcgctgcacattttcgacgcccatgatgga
gaagtgaacgccgtgaggtttagtcccggttcccgtctgcttgccacgggaggaatggac
cgcagggtgaagctctgggaggtcgtatctggccgatgtgaacccaaaggggcgctgacg
ggcagtaacgctggaatcaccagtatagagtttgatagtgcgggatcgtatctactggcc
gcctctaatgattttgcgagcagaatctggacggtcgacgactacagactgcggcacaca
ctcacaggtcacagcgggaaggttttatctgctcgctttctcctcgacaacgctcgaatc
gtctccggcagctacgatcgaacgctcaagctctgggatttacgcagcaaagtctgcatg
aagacagtgtttgctggttctagctgtaatgacatcgtctgcacggagcagtgtgtgatg
agcggacacttcgataagaaagttcgtttctgggacatcagagcagagactatcgtgaat
gagttggagttgctgggacgtgtaacgtctttggacctcaatcaagaccggaccgagctc
ctgacctgctctcgtgatgacctggtgaaaataatcgatctgcgcagtaatgcagttcgg
cagacgttcaatgctcaaggattcaagtgcggttcagacttcaccagggtcacattcagt
cctgatggaagttacgtggcggccggttctgcagacggtgttctgtacatttggaacgtt
ctaacagggaaactagacaaaactcttgataagggtcacagttctgccataaattcggtg
tcctggtctccatcgggcgcatacgtggccagcgttgagaaaggcagcaaggctgtgctt
tggtctgacatgtga
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