Chanodichthys erythropterus (predatory carp): 137004669
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Entry
137004669 CDS
T10334
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137004669 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137004669 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137004669 (srsf1a)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
SR proteins
137004669 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137004669
NCBI-ProteinID:
XP_067221332
LinkDB
All DBs
Position
17:complement(11952096..11956678)
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AA seq
255 aa
AA seq
DB search
MSGGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGAPRGRYG
PPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVR
KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRG
SPQYSPRHSRSRSRS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtggtgtgatccgcggccctgctgggagcaatgactgccgcatctatgtg
gggaatctgccccctgatatccgcactaaagatgtcgaagatgtcttttataagtacgga
gccattcgagatatcgatctgaaaaaccgacgaggcggacctccattcgcctttgtcgag
tttgaagaccccagagatgctgaagatgctgtctatgctcgtgatggctatgactatgat
ggctatcgtctacgagttgagtttccgagaagtgggagaggtatggggagaggtggtttt
ggcggcggcggaggaggtggcggcggcggtggtggtggggctcctaggggccgatatgga
cccccatccagacgttcggagtacagagtaatcgtatcagggcttccaccgagcggtagc
tggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgttacgctgacgttttc
cgtgatggaactggtgtggtggagtttgttcgcaaagaagacatgacctacgccgttcgc
aaactggataacacaaaattccggtcgcacgagggagaaactgcatacatccgcgtgaag
gtggacggtccccgcagtccgagctatggaagatcaaggtcaaggagccgcagtcgcagc
aggagtcgcagccgcagcaacaaccgtagccgaagctactccccacgccgcagccgagga
tccccccagtactcccctcgccatagccgttcccgctctcggtcctaa
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