Chanodichthys erythropterus (predatory carp): 137004713
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Entry
137004713 CDS
T10334
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137004713 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137004713 (prpf8)
Spliceosome [BR:
cery03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137004713 (prpf8)
Complex C
U5 SnRNP specific factors
137004713 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
137004713
NCBI-ProteinID:
XP_067221399
LinkDB
All DBs
Position
17:complement(20242069..20257789)
Genome browser
AA seq
2341 aa
AA seq
DB search
MAAAFPYRGVPGTMPPGVPPPPVVAPIPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGFV
DAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIR
DVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEP
PLDYADNILDVEPLEAIQMELDPEEDSSVVEWLYEHQPLKDTTKYVNGTTYRRWQFTLPM
MSTLYRLANQLLTDLVDGNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWN
EFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDP
LINPISHRHSVKSQEPLPDDDEEFELPEYFEPFLKETPLYTDNTANGIALLWAPRPFNLR
SGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFR
SFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKE
RKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRY
KYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGN
LLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLS
ESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKK
NLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKH
DTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEV
GIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYK
WCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNN
VVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSF
QDTATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCW
PRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFEC
RILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGST
TFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPV
VFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQP
WESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDK
GWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTY
FPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQ
LDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETI
HPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSH
DIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGAKPLIQQAMAKIM
KANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF
EGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPV
EEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQM
VLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDE
EWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTK
EQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSS
DDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTH
QTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIII
TCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVP
GQVSWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNFASLQEGELYNADREDMY
A
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccctacagaggtgttcctggaacaatgcctccaggtgttcctcca
cctcctgttgttgcaccaataccagattacatgaccgaggagaaactgcaagagaaagct
cggaaatggcagcaacttcaggccaaacgctattcggagaaaaggaaatttggctttgtg
gatgctcagaaagaggacatgccacctgagcatgtgcgaaaaatcatcagggatcatggt
gacatgacaaacaggaaatttcgtcatgacaagagggtctaccttggggcactgaaatat
atgccccatgcagtgctcaaactgcttgagaacatgcccatgccttgggagcagatcaga
gatgttcctgtgctctaccacattacaggcgccatttcctttgtaaatgaaatcccatgg
gttattgagccggtgtacattgctcagtggggcacaatgtggatcatgatgcgtcgtgag
aagagagacagacggcacttcaagcgcatgcgtttccccccgtttgatgatgaagagcct
ccattagattatgcagacaacatcttggatgtagagcctctggaagcgatccagatggag
ctggaccctgaggaggactcttctgttgtagaatggttgtatgagcatcaacctctaaaa
gataccacaaaatatgtgaatgggaccacatacagacgctggcagtttactttaccaatg
atgtccactctgtatcgattggctaaccagctgctgacagacttggtggatggaaactac
ttctatttgtttgacttgaaggctttcttcacctccaaagctttgaacatggccattcca
ggggggcccaaatttgagccgcttgtcagagacattaacctccaggatgaagactggaat
gagttcaatgacatcaacaagatcatcatcaggcagccaatcaggacagaatacaaaatt
gcattcccttacctgtacaataacctgccacatcatgtgcacctcacctggtaccacaca
ccaaacgtggttttcatcaagaccgaggatcctgatctgcctgccttctactttgaccct
ctgatcaaccccatctctcataggcactctgtcaagagccaagagccactgccagatgat
gatgaggagtttgaacttcctgaatactttgagccattcctgaaggagacgcccctctac
actgacaacacagctaatggaattgcgctgttgtgggcacctcgtccattcaatctccgc
tcgggaagaaccagacgggctattgatgtgcctctcattaaaaactggtatcgtgagcac
tgtcctgcaggccaacctgtgaaggtgcgtgtgtcttaccagaagctcctgaagtactac
gtgctgaacgctctaaaacacagaccacctaaggcacagaaaaagagatacctgttccgg
tctttcaaggccaccaaattcttccaatccacaaagctggactgggtagaagtcggtctc
caggtatgccggcagggctacaacatgctgaacctgctgattcacagaaagaacctcaac
tacttgcacttggactacaacttcaacttgaagcctgtgaaaaccctcacaacaaaggaa
cgtaagaagtccagatttggaaatgcgttccacttgtgccgtgaggttctgcgtttgagc
aagcttgtggtggacagtcatgtgcagtacaggcttggaaatgttgatgctttccagttg
tcagatggactacagtacatcttcgcccatgtcggtcagttgactggcatgtaccgctac
aagtacaagctcatgaggcagattagaatgtgcaaagacctgaagcatctcatctactac
cgtttcaacacaggcccagttgggaaaggtccaggctgtgggttctgggctccaggatgg
agagtctggctgttcttcatgagaggcatcacccctcttctggagcggtggctcggcaat
cttctggccaggcagtttgagggtcgacactctaagggtgttgccaagactgtgaccaaa
cagcgtgtggaatctcactttgatctggagttgagagctgctgtgatgcatgacatcctg
gatatgatgcctgagggtatcaagcagaacaaggccagaaccatccttcagcatctcagc
gagtcatggaggtgctggaaggctaacatcccttggaaggttcctgggcttccaaccccc
atcgagaacatgattctccgctacgtgaaggccaaagctgactggtggaccaacacggca
cactacaaccgtgagagaatcagaagaggagctactgtggataagactgtgtgcaagaag
aacctggggcgtctcactcgactctacctaaaggcagagcaggagagacagcacaattac
ctgaaggatgggccttacatcactgctgaagaggccgtggccatctacaccaccacagtg
cactggctggagagtcgtcggttctctccgatccccttccctcctctctcctacaaacat
gacactaagctgctcatcctggctttggagagactcaaggaggcttacagtgtgaagtca
aggctgaaccagtcacagcgtgaggagttgggtctgattgagcaggcctatgacaaccct
catgaggctctgtccagaatcaaacgtcacctcctcactcagagagccttcaaagaggtg
ggcattgagttcatggacctttacagtcacttggtaccagtttacgatgttgaacctctg
gaaaagatcactgacgcgtacctggatcagtacctttggtatgaggcagacaaacgcagg
cttttcccaccctggatcaagccagctgacacagagccacctccactgctggtgtacaaa
tggtgccaaggtatcaacaacctgcaggatgtgtgggagacagcagagggtgaatgtaat
gtcatgcttgagtctcgctacgagaagatgtacgagaagattgacttgacattgctgaac
aggcttttgcgtctcattgttgatcacaacattgccgattacatgacggccaaaaacaac
gttgtcattaactataaggacatgaaccacacaaactcgtacggtatcatccgtggcctg
cagtttgcctctttcatcgtgcagtactatgggttggtgatggacctgctggtgttgggt
ctgcacagagccagtgagatggcaggccctcctcagatgcccaatgacttcctcagtttc
caggacacggccactgagagcgcccatcccatccgtctttactgcagatacatagaccgc
attcacatcttcttcagattctctgcagatgaggcgagagatctgatccagaggtacctg
acggagcacccagatcccaacaatgagaacattgtgggctacaacaataagaaatgctgg
ccccgtgatgctaggatgagactgatgaaacatgatgtgaacttggggcgtgctgtgttc
tgggacatcaagaatcgcctccctcgttctgtgaccacagttcagtgggagaacagcttt
gtgtccgtgtacagcaaggacaaccccaacctgctcttcaacatgtgtggctttgagtgt
cgcatcctcccgaaatgccgcactagttatgaggagtttacgcacaaagatggtgtgtgg
aatttgcagaatgaggtaacaaaggaaaggacagcacagtgtttcctgcgtgtagatgat
gagtccatgcagaggttccacaacagagtgcggcaaattctgatggcttctgggtccacc
accttcactaagattgtgaacaagtggaacactgctctgattggtctgatgacgtacttc
cgtgaagctgtggtcaatactcaagagcttctggacctgctggtgaagtgtgagaataag
atccagacccgtatcaagattggtttgaactccaaaatgcctagccgtttccctcctgtg
gtgttttacacccctaaggagttgggtggacttggaatgctttccatgggacacgtacta
atcccacagtctgaccttaggtggtccaaacagactgatgtgggcatcactcatttccgc
tctggtatgagtcacgaggaggatcagttgattcctaatctgtaccgctacatccagcca
tgggagagcgagttcattgactctcagagagtttgggccgaatacgccctcaaacgtcag
gaggccattgctcagaacagacgtttgacactggaggatctggaggactcctgggacaga
ggtattccacgtataaacaccctcttccagaaggacagacacactcttgcttatgacaag
ggctggagagtcagaacagacttcaagcagtaccaggttctgaagcaaaatccattctgg
tggactcaccaaaggcatgatgggaaattgtggaatttgaacaactaccgtacagacatg
atccaggcacttggaggagtggaaggcatccttgagcacactctgtttaagggaacctac
ttccccacctgggagggtctcttctgggagaaggccagtggtttcgaagagtccatgaaa
tggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaaccgacgattc
accttgtggtggtctcctacaatcaacagagccaatgtatatgtgggtttccaagtgcag
ttggacctcactggaatcttcatgcatggtaaaatccccacactcaagatctctctgatc
caaatcttcagagctcacttgtggcagaagattcatgagagcatcgtcatggatctctgt
caggtgtttgaccaagagctcgatgctttggagatcgagactgtccagaaagagacaatc
catcccaggaagtcttacaagatgaattcctcctgtgctgacattctgttgtttgcatcc
tacaagtggaatgtctcgcgtccctcacttctagcggattccaaggatgttatggacagc
accaccacacagaagtactggattgacattcagctcagatggggtgactacgactcccat
gacattgaacgatatgccagggccaagttcttggactacaccactgacaacatgagtatt
tacccatcacccactggagtcctaatcgccattgatctggcatacaaccttcacagtgct
tacggaaactggttccctggagccaagccattgatccagcaggccatggcgaagataatg
aaggccaaccctgctctgtatgtgctgagagagcgaatccgcaagggtctgcaactctac
tcttcagagcccactgagccttacctatcttcccagaactatggagagctcttctccaac
cagatcatctggtttgtggatgacaccaatgtgtacagagtcaccatccacaagaccttt
gaaggtaacttgaccaccaaaccaatcaacggagcgattttcatcttcaaccccagaact
ggacagcttttcctgaagattattcacacctctgtatgggcaggacaaaagcgtcttgga
cagctggctaagtggaagactgctgaagaagtggctgccctgattcgatcgctgcctgtt
gaagagcagcccaaacagattattgtgaccaggaagggcatgttggatcctcttgaggtg
cacttgctggacttccccaacattgtaatcaaaggctctgagcttcagctgcccttccag
gcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagagcctcagatg
gtcctgttcaatctgtatgacgactggctgaagaccatctcctcttacactgcattctct
cgtttgatcttaatcctgagagcacttcatgtcaataatgaccgtgccaaagttatcctg
aagcctgacaagaccaccatcaccgagccccaccacatctggcccactctgaccgatgag
gagtggatcaaagtggaggtgcagctcaaagatctcatcctggctgactatggcaagaag
aacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatcctgggtatg
gagatctctgctccatcccagcagagacagcagattgctgagatcgagaagcagaccaag
gagcagtctcaactaacggccacacagactcgcactgtaaacaaacatggagatgagatt
atcacctccaccaccagcaactacgagacgcagaccttctcttccaaaactgaatggaga
gtcagggcgatctctgctgccaacttgcacttgcgtactaaccacatctacgtatcatcg
gatgacatcaaagagactgggtacacttacatcctgcccaagaatgttctgaagaagttc
atctgcatttcagatctgcgtgctcagatcgcaggttatctatatggaaccagccctcca
gataaccctcaggtaaaggagatccgctgcattgtgatggtgccacagtggggtacgcat
cagacggttcacctgcccaaccagctgccacaacacgagtacttgaaggaaatggagcct
cttggatggatccatacacagcccaatgaatcaccccagctttctcctcaggatgtcacc
actcatgcaaaggtcatggctgacaacccatcctgggatggcgagaagactatcattatt
acttgcagtttcactcctggttcctgcacgctgactgcctacaagctgactcccagtggg
tatgagtggggtagacaaaacacagataagggtaataaccccaaaggttacttgccctct
cactatgaaagagtacagatgctcttgtctgaccggttccttggtttcttcatggtgcct
ggacaggtttcttggaactacaacttcatgggtgttcgccatgaccccaacatgaaatat
gacctacagttgtccaacccaaaagagttctaccatgaagttcacagaccatctcacttc
ctcaactttgcttctctgcaggaaggtgaactgtacaatgctgaccgtgaggatatgtat
gcataa
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