Chanodichthys erythropterus (predatory carp): 137004737
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Entry
137004737 CDS
T10334
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137004737 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137004737 (dhx16)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137004737 (dhx16)
Spliceosome [BR:
cery03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137004737 (dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
PWI
AAA_30
Flavi_DEAD
Cas3-like_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
137004737
NCBI-ProteinID:
XP_067221435
LinkDB
All DBs
Position
17
Genome browser
AA seq
1053 aa
AA seq
DB search
MASLEQWVSDQLHDILGLSDRYVAQFMIGLVQKSSGPQDFVARLQETGTIDIDQRITAFA
HELYNKAPKKHVVEKPARAIERQVIEMERKNRTYTLLEDSESEGETVKERGKEKKTKDRD
KGKKRKHLRQKREESPSSSEEDKKKSSKVTNEPKKAAKEEEEEEWEREERERLQDLEERD
AFAERVKQKDKDKTRHVLERNDKKAYEEAQKRLKMAEEDQRKMLPELRKESRRQYLSKRE
QEKLEDLEAEIADEEYLFSTQKLTDKERKDLEYKRQIRDLARDYKKAGAKEQEERKNRYY
MPEEKRNKSIPQKDMELEFEETPREGGGEQGRWEEARVATATLQFGAREERERRIKEEQE
KYQLILEEEEMINFVSTAITMKGTLSEKESEPELSQVEKDKLSIQEVRRSLPIFPYREDL
LAAIKDHQILVIEGETGSGKTTQIPQYLLEDGYTEGGMKIGCTQPRRVAAMSVAARVAQE
MNVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVVIIDEAHERTLH
TDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPE
ADYLEACVVSVLQIHVTQPTGDILVFLTGQEEIETCCELLQERCRRLGSKISELLVLPIY
ANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMES
LIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLK
SLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMI
LASEHYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHMVLLNVYTQW
VESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSNGDSVPIRKAVTAGYF
YHTARLSKGGYKTVKHQQTVFVHPNSSLFEEQPRWMIYHELVFTTKEFMRQVIEIENGWL
LEVAPHYYKNKELEDSSSKKMPRKQGKAREELG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggccagtctggaacagtgggttagtgaccagctccatgacatcctgggtttgagtgac
aggtatgtggcccagttcatgatcggtctggtgcagaagtcttctggacctcaggacttt
gtggctcggcttcaggaaaccggaaccatcgacattgatcaaagaatcacggcgtttgcg
catgagctgtacaacaaagctcccaaaaaacatgtggtggaaaaacccgcccgagcgata
gaacgacaagtcatagaaatggagagaaagaacagaacctacactcttctggaggacagt
gagagcgaaggagagacagtcaaagaaagaggaaaagagaagaaaacaaaagaccgagac
aaaggaaagaagaggaaacacctcagacagaaacgagaggaaagtccatcgtccagtgaa
gaggacaagaaaaagagctctaaggtcacgaatgagccaaaaaaagctgctaaagaagag
gaggaggaagaatgggagcgggaagagagagaaagacttcaagatctggaggagagggat
gcatttgctgaacgagtgaaacagaaagacaaagacaagacaagacacgtacttgaaaga
aatgacaagaaggcttatgaggaagctcagaaaaggctcaaaatggctgaagaggatcaa
aggaaaatgcttccagagttaaggaaggagtcacgtcggcagtatctgagcaaaagagag
caggagaagctggaagaccttgaggctgaaattgcggacgaggaatacctcttctccact
cagaaactcaccgataaggaaaggaaagatctagagtacaagcggcagatcagagacctg
gcccgagactacaagaaagcaggagccaaagaacaagaggagaggaagaacagatactac
atgccagaagagaaaagaaacaagtccattcctcaaaaagacatggagctggagtttgag
gagactcccagagagggaggcggggagcagggccgctgggaagaggcgagagtggccact
gccaccctgcagtttggggccagagaagagcgggaacggcggataaaggaggagcaggag
aagtatcagctcattttagaggaagaggagatgatcaacttcgtcagcacggccattacc
atgaagggaacgctgtcagagaaggaaagtgaacctgagttatcacaagttgagaaagac
aagctgtccattcaggaagtgagacgtagcctgcccatctttccttacagagaagacctt
ctagccgccatcaaagaccaccagatcttggtcatagaaggagaaaccggatctggcaag
accacccagatccctcagtatctcctggaagatggttacactgaaggaggaatgaagatc
ggctgcactcaacctcgaagagtggcggccatgtctgtagcagctagagttgcacaggag
atgaatgtcaaactaggaaatgaggtgggctacagcatccgttttgaggactgtacatca
gagaggaccatcctgaagtacatgactgatggcatgttgctcagagagtttcttacagag
cctgaccttgccagttacagtgtggtcatcatcgatgaggcccacgagagaacgttacac
acagacatcctcttcggtctaattaaagacattgcacgtttccgccctgatctgaaggtt
ctggtggccagtgccactctggacactgagcgtttctccagcttctttgatgatgcacct
gtgtttaggattccaggccgtaggttccctgtggacatctactacacaaaggctccagag
gctgactatctggaagcatgtgtggtgtcagtgttacagatccatgtcactcaaccgact
ggagacatactggtcttcctcacaggacaggaggagattgagacttgctgtgaacttcta
caggagagatgtaggagactgggctctaagatttctgagctccttgttctgcccatctat
gccaacttgccctcagacatgcaggcaaaaatcttcaatcccactccgcctggagcgcgc
aaagttgtggtggccacaaatatcgcagagacatctctcaccattgacggcatcatctac
gttattgatccaggtttctgcaaacaaaagagctacaatgcaagaacaggaatggaatct
ctcattgtcacaccctgttcacgagcctctgccaatcagagagcaggtcgtgcaggaaga
gtggctgctgggaaatgttttaggctgtacaccgcctgggcctttaaacatgagatggag
gagaccactgtccctgagattcagagaacaaacctgggaaatgtggttctgctgctcaaa
agtctcggtataaatgacctgattcatttcgacttcatggatcctcctcctcacgaaacg
ctggtgttggctctggagcagctctacgctttgggcgccctcaaccacctcggtgaactc
actaagctcggccgaaggatggctgaacttcctgtggaccccatgctgagtaaaatgatt
ctggcttctgagcattataagtgctctgaggaggttctgaccatcgcagccatgctgtca
gtgaacaactccattttctaccgccccaaggacaaagtggtccatgctgacaacgctagg
atgaactttgtggtaccaggaggagatcacatggtgctgctcaatgtatatacacagtgg
gtagagagcggttactccactcagtggtgcttcgagaacttcatccagttccgatctatg
aagagagctcgagatgtgcgtgatcagctggaggggttgatggaccggatcgaggtggaa
ctgtgcagctccaatggtgacagcgtgcccatccgcaaggcagtgactgcgggatatttc
taccacacggcacgcttgagcaaagggggttataaaacagtcaaacaccagcagactgtt
ttcgtccatcccaacagctcactttttgaggaacagccacgctggatgatctaccacgag
ctggtctttaccaccaaagagttcatgagacaggtgatagagattgaaaacggctggctg
ctggaagtggctcctcattattataagaacaaagaactagaggacagcagcagtaaaaag
atgccccgcaaacaaggcaaagcccgtgaagaactgggctga
DBGET
integrated database retrieval system
