Chanodichthys erythropterus (predatory carp): 137004916
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Entry
137004916 CDS
T10334
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03440
Homologous recombination
cery03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137004916 (brip1)
03460 Fanconi anemia pathway
137004916 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cery03400
]
137004916 (brip1)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137004916 (brip1)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
137004916 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
137004916 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ARCH_RTEL1
HBB
Motif
Other DBs
NCBI-GeneID:
137004916
NCBI-ProteinID:
XP_067221724
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All DBs
Position
17:complement(19695973..19730141)
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AA seq
1244 aa
AA seq
DB search
MAAAPVDYTIGGVKINFPCKAYPSQLAMMNSIIRGLNHGQHCLLESPTGSGKSLALLCSA
LAWQKAQFGKEQPDAGTSSADFKKPEVVTPCQCVCHSRNAYPTFNSTASKPPLVDLTSEG
TSAEATTSLSKGAVQSDQPRKATLSSRLSEKLQASLSNGEQDDDFKIDRKRIRTPGTEQK
SSKRRCLERGVIYIDDDEEEENLERPVPGTQSWTMELNSGARADCCQSQPQCPSPVSCSR
CPCANLKAGQKLVEKSKDNEKDKEGSGRKKIPKIFFGTRTHKQITQIARELKRTLYSTVP
MTILSSRDHTCVHPEVVPHANRNERCKELLEAKNGLSCRYYHNVHKMRDQSSLQWVHGLH
QAWDIEDLVRLGGKLRSCAYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKEQIVVL
DEAHNIEDCARESASFTLNQAQLLLARDEIDGMVTHNIRRDQHRPLLAFCCSLANWVQES
CNALEERNYESSCKVWTGTEVLGIFHGLGITADTFSLLQKNLAAVLEKEERIGVVNGRED
TVQVPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQSYMWTTQQDPPDAHGFFA
RPQRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSDSVRSIVLTSGTLSPMGSFSSELGIKF
SIQLEANHVISKSQVWVGTVGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCHTVSRGV
LCFLPSYKMLDKLRDRWMNTGLWDKLEERKTVITEPRGGGKGDFDELLQTYYEAIRGTVA
NSENRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKS
RGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFNTNPNKYITGLSKWVRQL
VRHHDTFTGAMQSLESFSQGQQGAVETFEETQSQAVSQYPSPSNVTSPPPEIITPHKPFD
PQPAPPNLHTEVWAANSESRSSESGDQKNIQHPSEPITLPSRERNVQRIAWPTSHLFTSS
PVSSQFKTSIFQSEQDVNSVNNKQVQQELVLPVLPVAPKHQINGAPVLNDSSFEPQHEQL
FVIPNSTLKQNTSGMDLDDTEADEQSIFYSPELFEGDGEEKEETIQVEKSPAEVSHPSAN
STASILLEDLFGLEQGKRTLSEDLVSSTVPDNTLLQSCTEQTGLNCSTDFESVPASQNGA
SSSRSCRLSRSRQKRPSTSAASGKLTNYFKFVPPTSKPCITIDD
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggctccagtggactacaccataggaggggtgaaaataaacttcccctgcaaa
gcttatccctctcagctggccatgatgaattcaatcattcgtggacttaaccatgggcag
cactgtcttttggagagtcctactggcagtgggaagagtcttgctttgctttgttcggcc
cttgcatggcagaaagcacagtttggtaaggaacagccggatgcaggcaccagttcggct
gactttaagaaaccagaagtggttactccatgtcagtgtgtgtgccatagccgaaatgca
tatcccactttcaacagcacagcatctaaaccaccactggtggatcttaccagtgaaggt
acttctgctgaagctacaacttctctgtcaaaaggagcagtccaaagtgaccagcctaga
aaggcgactttgtcttcccgtctctctgagaaacttcaagcctctctctccaatggagaa
caagatgatgattttaagattgacaggaagcgcattcgtacaccaggcacagagcaaaag
agcagcaagcgaagatgtcttgaacgaggagtgatttacattgatgatgatgaagaggag
gagaatctggagagaccagtgcctgggactcagagttggaccatggaattgaacagtggt
gccagagctgactgctgtcagtcacagccacagtgtccttctcccgtgtcttgttctcgc
tgtccttgcgccaacctcaaagcaggacagaaactggttgaaaagtccaaggacaacgag
aaagataaagagggaagcgggaggaaaaagatcccaaagatctttttcggcactcgtact
cataagcagatcacacagattgcacgggagttgaaacggacactttactccaccgtgccc
atgacaatactgtccagccgagaccacacctgtgtccaccccgaagtggtacctcatgcc
aaccgcaacgagcgctgcaaggagctgctggaggccaagaacggtctgtcatgccggtac
taccacaatgtgcataaaatgcgtgatcagagctctttacagtgggttcacgggctacac
caggcctgggacattgaggatctggtgcgtcttggtggcaagctgcgatcctgtgcttac
tacgcagcacgggaactcatgcaagaggcctgcattgtgttctgtccttacaactacctg
ctggaccctctcattcgtgagagtatggaaatcaatctgaaggagcagattgtagtgctg
gacgaggctcataacatagaggactgtgcccgtgagagtgccagtttcaccctgaatcaa
gctcagctgttgctggcacgtgatgagatcgacggaatggtgacacacaacattcggcgc
gatcaacacaggccactgctagccttctgctgcagccttgccaactgggtgcaggaaagc
tgcaatgccttggaggagcgtaattatgagtcttcgtgtaaggtctggacaggaacggag
gttcttggcatcttccatggtcttggcatcacagcagacaccttctctttgctacagaaa
aacctggcagcagtactagagaaggaggagcggatcggggtagtgaacgggagagaagat
acggtgcaggttcccaccatcagctccaacactcagtcaatgctcaaaagcctctttatg
gtgctggaatttcttttcagacaaaattgcaggtttgcagatgattaccgtgtggctctc
cagcagagctacatgtggaccacccagcaggacccgcctgatgctcatggcttttttgca
cgaccccaacgtcgccgacagagcacccgcaccaaaactctagtgcacaccctcagcttt
tggtgcctcaaccctgctgtggcattttcagatctgagcgattcagtgcggagtattgtg
ctgacttcaggcaccctctctcccatgggttccttttcctctgagctgggcattaaattc
tccatccagctagaggccaatcacgttatcagcaagtcacaggtctgggtcggaacagtt
ggtgcagggcctcagggtcgtaaactttgtgccacatttcagcatgcagagacgtttgcc
ttccaggatgaagtaggggctctgcttttgaaagtgtgccacacagtgagtcgaggggtt
ctctgcttcctgccatcctacaagatgttggataaattgagggaccgctggatgaacaca
ggtctgtgggacaagcttgaggagcgaaagactgtcatcactgagccacgtggtggtggc
aagggtgattttgatgagctgctgcaaacctactatgaggccatcagaggaacagtagcc
aacagtgaaaacagagatggagcattacttgtagctgtttgcagagggaaagtgagcgag
ggattagactttaccgatgacaatgccagagcagtggttactattggtatcccattcccc
aatatcaaagatttgcaggttgaactgaagatgaaatataatgacaaacatgccaagtca
cgaggacttctgcctggtggccgctggtacgagattcaagcatatcgggcactaaaccag
gcacttggaaggtgtatacgacatcgaaatgactggggggcacttatactggtagatgac
cggttcaacacgaacccaaacaaatacatcacaggcctgtcaaagtgggtgcgtcagcta
gtgaggcaccatgacaccttcactggcgccatgcagtccctggagtccttttctcaaggc
cagcagggggcagtagagaccttcgaagagacacaatctcaggctgtctctcaataccca
agcccctccaatgttacctctccccctcctgagataatcaccccccacaagccatttgac
cctcagcctgcaccgccaaacctacacaccgaggtgtgggcagccaactctgagagcagg
tcttctgaatcaggtgaccaaaagaatatacagcatccttctgaaccaatcacattgcca
agcagagaacgtaatgtccaaagaatagcatggcctacaagccatctcttcacctcctct
ccagtcagtagccaatttaagacttctatttttcaatccgagcaggatgtgaattcagtg
aataacaagcaagttcagcaggaacttgtgcttcctgtgcttcctgtggcaccaaagcac
caaataaatggtgctcctgtcctaaatgacagctcatttgaacctcaacatgagcagctc
tttgtgatccctaactctaccttgaagcagaacaccagtggaatggaccttgatgacact
gaagcggatgaacaaagtatcttctacagccctgagctttttgaaggagatggggaggag
aaagaagagactattcaggtggaaaaatcacctgcagaagtcagccatccttctgctaac
agcacagccagcattcttttggaggatctgtttggtttagagcagggaaagaggacattg
tctgaagaccttgtgagcagcactgtcccagacaacacattattacagagttgtacagag
cagaccggtttaaactgtagtaccgactttgagagtgtgcctgcctcacaaaatggtgcc
agcagtagtcggtcatgtagactctccagatctaggcagaaaaggcccagcacatccgca
gcctcaggtaaactcaccaactactttaaatttgtgcccccaaccagcaaaccatgcatc
acaattgatgactga
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