Chanodichthys erythropterus (predatory carp): 137005235
Help
Entry
137005235 CDS
T10334
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
137005235 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cery01007
]
137005235 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cery03016
]
137005235 (farsb)
Enzymes [BR:
cery01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
137005235 (farsb)
Amino acid related enzymes [BR:
cery01007
]
Aminoacyl-tRNA synthetase
Class II (U)
137005235 (farsb)
Transfer RNA biogenesis [BR:
cery03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
137005235 (farsb)
Prokaryotic type
137005235 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
PhoH
Motif
Other DBs
NCBI-GeneID:
137005235
NCBI-ProteinID:
XP_067222153
LinkDB
All DBs
Position
17:5988160..6000572
Genome browser
AA seq
590 aa
AA seq
DB search
MPTVSVKRDLLFEALGQTYTDEEFDELCFEFGLELDEITSEKDIISREQGDEKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERMEAPRYKRVSPANGGEPQRLVITEETASVR
PYAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPP
ADIRFKPLNQSKEYTATELMSLYKADSHLKHYLHIIENEPLYPIIYDSNGIVLSMPPIIN
GDHTKISLNTKNIFIECTATDHTKAKITLDMVVTMFSEYCEEPFTVEEAEVVYPDGRLCV
YPELAYRTETLSGDFINKKVGINESAESIAQLLTRMCLRSEITGEGDQIQVEIPPTRSDV
IHACDIMEDAAIAYGFNNIVRSTPRTYTVANQLPLNKLTELLRQDLAAAGFTEALTFALC
SQEDIADKLGKNIAETRAVHISNPKTAEFQVARTSLLPGLLKTVAANRKMPLPLKLFEIS
DVVLKDETKDVGARNNRRLCAVYYNKSPGFEVIHGLLDRVMQLLDVKPGRNQGYHIQAAE
DSTFFPGRCAEILSGGKSIGHLGVLHPDVISRFELTMPCSAIDIDIEPFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagagagacctgctctttgaagctctgggacaaacatacacg
gatgaagaatttgatgaactgtgtttcgagtttggcctcgagctggacgaaatcacgtca
gagaaggacatcataagccgagagcagggcgatgagaaggcagagggggcgtctgatgtt
gtgctctacaagatcgacgttccagccaaccgctatgatctgctgtgtctggagggtctc
gtcaggggtctgcaggtcttcaaggagaggatggaagctccccggtacaagcgtgtgagt
ccggcaaatggaggagagcctcagcggctggtcataactgaggagacggcgtctgtgagg
ccgtacgctgtagcagctgttctgcgcaacatcaccttcactcaggagcgatacgacagc
ttcatagagctgcaggagaaactgcaccaaaacgtctgcaggaaaaggacgctggttgcc
attggaactcatgatttggacaccatctccggtccgttcacctacacagccaaaccgccc
gcagatatccgcttcaaaccgctcaatcagagcaaagagtacaccgccactgagctcatg
agcctctataaggctgacagtcatctgaagcactacctgcatatcatcgagaacgaacct
ctctaccccattatatacgacagtaatggaatcgtcctgtctatgcctcctatcatcaac
ggggaccacactaaaatctcattaaacacaaagaacattttcattgagtgcacagccaca
gaccacacaaaggcaaagatcacgctggacatggtggtgaccatgtttagtgagtactgt
gaggagccgttcacggttgaggaggcggaggttgtttatcctgatggcagattgtgtgtg
tatcctgagctggcatacaggacggagacactgtctggggacttcatcaacaaaaaagtt
gggatcaatgaatcagcagaaagcatcgctcagctgctgacccggatgtgtttgaggtca
gagatcaccggtgagggcgatcagatccaggttgagatcccgcccacacgctctgacgtc
atccacgcctgtgacatcatggaggatgctgccatagcgtacggcttcaacaacatcgtc
aggagcactccacgcacgtacacagtagccaatcagctccctctaaataaactaacggag
ttactgaggcaagaccttgcagccgccgggtttactgaagctctgacattcgctctgtgt
tcgcaagaagatattgcagataaactcgggaaaaacatagcagaaaccagagcagtccac
atctccaacccaaagactgcagagtttcaggtggcgcgcacctctcttcttcctggtctc
ctgaaaacggtcgctgccaacaggaagatgcccctacctctcaaactgttcgagatttca
gacgtcgtcctgaaggatgaaacaaaagatgtaggagcccgcaacaacaggcgactctgt
gccgtttactacaacaagagcccggggtttgaggtcatccatggacttctggaccgggtc
atgcagctgctggatgtcaaaccaggccgtaaccaaggataccacatccaggcggcagag
gactccaccttcttccctggccgctgtgctgagattttgtcaggtggcaaaagcatcgga
cacctcggggtccttcaccctgatgtcatcagtcgttttgagctgaccatgccctgctct
gccatcgatatcgacatagagcccttcctgtga
DBGET
integrated database retrieval system
