Chanodichthys erythropterus (predatory carp): 137005451
Help
Entry
137005451 CDS
T10334
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137005451 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137005451 (robo1)
Cell adhesion molecules [BR:
cery04515
]
Immunoglobulin superfamily
ROBO family
137005451 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
ig
Ig_2
Pur_ac_phosph_N
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
DUF7908
Motif
Other DBs
NCBI-GeneID:
137005451
NCBI-ProteinID:
XP_067222468
LinkDB
All DBs
Position
17:complement(30423225..30675162)
Genome browser
AA seq
1319 aa
AA seq
DB search
MGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITAVERSDG
GYYSCQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVLGCQATGTPT
PTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASWKAYLEVQ
EFGAPVQPGRPTDPNLIPSAPSKPEVTDVSRTSVSLSWKPNLNAGATPTSYVIEAFSHAA
GSSWQTLADHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPISDAVKTQDIPPTSQG
VDHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPEGAQQRVE
WAMFEVRTPGEHSAVVPQLKKGVTYEFKVRPFFNEFQGTDSDIKVGKTLEEAPSAAPRGV
TVTGSGDNGTAILVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTNSVLIPGL
VAGITYKVEVAASTGAGPGVKSEATSFQLDSSGRVLPPPLDDENTISQQISDVVRQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEAVSSAG
RPGLLNIGEPATQPWLADTWPNSCSNHNDCTINCCTGSNGNSDSNLATYSRPADCIANYS
NQMDNKASNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATTQLIQ
SSLANNNMNSSSGGSGGGSADLNEKQSWKSSQGTPQKQADINTPLQYNVMEQNKLNKDHY
RGEGPVSVTIPYNQAQDALTGGTYSSSDRGSSTSGSQGQKKGGRTTKQAKQNTINWTELL
PPPPVNPPPCQEYTLSMDDSYDTDMQCPLPPSRMYLQPDELEEEEEEVELERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEEMHPMLQDNSDLHERRRLLVSPPPPPRPLSPPHTYG
YISSPLGLDTDGLEEEEDEEEGDETDAEVARVHQHHTHPHQQHLPQQRALLRGLEQTPAS
STCDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVAAAAEYAGL
RVAKHPGKGHHQLPVSGARKYQNLPAGHRPGSPVSTDSNISAAPGQRRPLKRQKQHPAAQ
TGYQRREAYTEDLPPPPIPPPAMLKSPTHPAKTIPEGPRGAMSPRSSSADGKDRRTGSGG
PRPRDGSDTRTSSSERREGQDIQRGQRTGKSSKQDAAPKSRQHPGSEDILPYSRPSFPAV
HSPRGERDPSSSSSLSSRGSGGRRRGEGAPGARRNPADVGLNTTGAFQTGGEELEMVES
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcactgtgacctttcagtgcgaagccacaggaagtcctcagcctgccatattt
tggcagaaagaaggcagtcagaacctcctgttctcctctcaacctcctcctccctccagt
cgattctctgtctctcagacgggcgatctgaccatcacagcggtggagcgttcggacgga
ggctactacagctgtcaggctctgaatatcgctggcagtgtgatcaccaaagccctgctg
gaggttacagacgtgatctctgacagacctccacccatcgtccgccagggtcccaccaac
caaacagtggctgtagatgggacggtggtcctgggatgccaagccaccggcacgccgact
cccaccatcctgtggaggaaagacggggtcctggtgtccacccatgattctcgactcaaa
caactcgacacgggagccctgcagatccgttacgctaagctgggagacactggcatgtac
acctgcaccgcgtccacccccagcggagaggcatcgtggaaggcttacctggaggtgcaa
gagtttggcgctcctgttcagcctggccgacccacagatccaaacctcatccctagcgct
ccttccaaaccagaggtcacagacgtcagccgcacctctgtctctctgtcctggaagccc
aacctgaacgctggagccacgcccacatcttatgtgatagaggccttcagccatgcggcg
ggcagcagctggcagacgctcgcggatcacgtgaagacggagagcttcgttctaaagggt
ctgaagcccagcgccgtctacctgttcctggtgagagcggccaatgcgtacggcttgagt
gaccccagccccatcagcgacgctgtcaaaacacaagacatcccaccaaccagtcaggga
gtggaccatggccagatccagagggaactaggagatgttgttattcacctccacaatccc
acaattctctcatcatcctccgtcagagtccagtggactgtggagcagcagtctcagtac
attcagggctataaggtgatgtaccggccgtcccctgagggcgctcagcagcgtgtggaa
tgggccatgtttgaggttcgaaccccgggggagcacagcgcagtcgtcccccagctcaag
aagggcgtgacctatgagttcaaagtccgacctttcttcaatgagttccaaggcaccgac
agtgacatcaaagtgggcaagaccctcgaggaagctcccagtgccgctcccaggggggta
accgtaacaggaagcggagacaacggcacagcgatactggtatcctggcaaccgccccca
gaggaggagcagaacggcgtggtgcaggagtataagatctggtgtcttggtaacgaaagc
cgataccacattaaccgcactgtggacggttctacaaactcggttctgattcccggactg
gtcgcagggatcacgtacaaggttgaggtggcagccagcaccggggccggtcccggggtg
aagagcgaggctacgtccttccagctagactcgtcaggtcgtgttcttccgcccccgctg
gacgatgagaatacgatttctcagcaaatctcagacgtggtccgtcagccggccttcatc
gcaggcatcggtgcagcctgctggatcatcctcatggtcttcagcatctggctgtaccgc
caccgtaagaagagaaacggcctcagcagcagctacgccggcatccgcaaagtgccctcc
ttcaccttcacccccacagtggcctatcagagaggaggagaggccgtcagcagtgcagga
aggccaggtttattaaatatcggtgaaccagcaacccagccctggcttgcggacacctgg
cccaacagctgctccaatcacaacgattgcaccatcaactgctgcaccgggagcaacgga
aacagcgacagcaacctggctacctacagccgcccagccgactgcattgccaactatagc
aaccaaatggacaacaaggccagcaacctgctggctccagacacgggcctttacagcgac
gtggacctctccaacaagatcaatgagatgaagaccttcaacagccccaacctgaaggat
ggccgtttcgtggggcccggtggtcagcccacaccctatgccaccacccagctaatccag
tccagcctggccaacaacaacatgaacagcagcagtggcggaagtggaggaggaagtgca
gaccttaacgagaagcagagctggaagagcagccagggaacacctcagaaacaggccgac
atcaacacaccactgcagtataacgtcatggagcaaaacaaactgaacaaggaccactac
cgaggtgagggtccggtctctgtcaccatcccctataaccaggcccaggacgccctcaca
ggaggaacctacagcagctcggacagggggagcagcacctctggaagtcaagggcagaaa
aaaggtgggcgaacaactaaacaggccaaacagaacacaattaattggaccgaactgttg
ccacctcctccggttaatccaccaccatgtcaggaatacaccctctctatggacgacagt
tatgacacagacatgcagtgccctttaccaccatctcggatgtatctgcaacctgacgag
ctagaagaggaggaggaagaggtggagctggagcgcggacctacgcctcctgtacgggga
gcggcttcctcacctgccgccgtgtcctacagtcaccagtccaccgcgaccctcaccccg
tcccctcaggaggagatgcatcccatgttgcaggataactctgacctacatgagcgcagg
cgactcttggtgagcccaccccctccaccacgccccctctccccaccgcacacgtacggc
tacatctccagccccctgggtctggacacggatggcctggaggaagaagaggacgaggaa
gagggtgatgagacagatgcagaggtggctcgagttcaccagcaccacacccaccctcac
cagcagcacttgccccagcagagggctctcctgcggggcttggaacagaccccggcctcc
agcacctgtgacctggagagctctgtcactggatctatgataaatggctggggctcggct
tcagaggaagacaacgcctcatcgggtcgttccagcgccgtcagctcatcagacggatct
ttctttacagatgctgattttgctcaggccgtggcagccgcggccgaatatgctggtctg
cgagtggcaaagcatcctgggaaaggccaccatcagcttccagtgtctggagcacggaaa
taccaaaacctccctgcgggccatcgtccaggcagcccagtgtccacagacagtaacatt
agcgcagccccgggtcagaggaggcccctaaagaggcaaaaacaacatccagctgctcag
acaggctaccagcggcgagaggcctatacagaggatcttccccctcctccgattcctccc
ccagctatgctgaagtctccaacacacccggccaaaactatcccggagggcccacggggg
gctatgtcgcccagatccagttctgctgatggcaaggacaggcgaacgggttcgggcgga
cccaggccccgggatggctcggacacccggaccagctcttcagaacggcgggagggccaa
gatatacagaggggtcaaagaaccgggaaaagcagcaaacaagatgcagccccaaagagc
cgccagcacccaggctcagaggacatcctaccttatagtcgcccatctttcccagccgta
cacagtcctcgtggagagagggaccccagctcctccagttcactgtcctctcgggggtct
ggtggacggcggagaggcgagggggctccaggggcccgcagaaaccctgcagatgttggg
ctaaacaccacaggagccttccagacaggaggggaggagcttgagatggtggagagctga
DBGET
integrated database retrieval system
