Chanodichthys erythropterus (predatory carp): 137005627
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Entry
137005627 CDS
T10334
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cery00536
]
137005627 (slit3)
Glycosaminoglycan binding proteins [BR:
cery00536
]
Heparan sulfate / Heparin
Axon guidance molecules
137005627 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
LRRNT
EGF_TEN
LRR_9
Laminin_G_1
LRRCT
LRR_14
LRR_EndoS
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
137005627
NCBI-ProteinID:
XP_067222562
LinkDB
All DBs
Position
1:complement(3858993..4081373)
Genome browser
AA seq
1519 aa
AA seq
DB search
MMRWVKYWGTVAVLCGLLCCAVNGCPHKCSCSGSHVDCQGQGFRTVPRGIPRNAERLDLD
RNNITRITKVDFTGLKNLRVLHLENNQISVIERGAFQELRQLERIRLNRNRLQVLPELLF
QSTPKLGRLDLSENQIQAIPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLN
NNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPAHMR
GLNVPDVQKREFVCTGPTQSEPRSCAPQVSVCPADCTCNNNIVDCRRKGLTEIPANLPEG
IVEIRLEQNMIKSIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIT
EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFTPLRA
IKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRCTGA
EDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLRLNDNEIPILE
ATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQTVSGRMFKGLSGLK
TLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCD
CHLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPDFSCDGTEENICLPSAPRCPD
SCTCSDTVVRCSNRGLRSLPKGIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSI
SLLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTIPEGAFSHLT
SLSHLALGANPLYCDCELRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTPLNRFQCKG
PADLNLMSKCAPCLAAPCQNNGTCVSDVTGSYHCTCPFGYKGRNCEIPINACISLPCVNG
GTCHLTPGLDGQYSCVCPPGYEGQQCELNPDDCEDNDCENNSTCVDGINNYTCVCPPNYR
GDLCEEVVDPCLPGFDPCQHDSKCVPLSKGYRCECLPGYVGQQCEQDYNDCLENKCQHGA
ECVDAINGYTCVCREGFSGLFCENSPPMVLLQKTSPCDQSDCQNGAQCLVMEGEPMCRCL
PGFFGIKCHKMVTVHFLGKDTYVELSGTKIRPPMHISLQVATDKDNGILLYKEDHDPLAL
ELYQGHIRLIYDVAKYPPTTVYSVESVNDGLFHMVEVLIQNQTLSLVVDKGAPKSLGKLP
RPPAVDHNTHLYIGGVPSLIDTVGLRPGPDRPFQSFNGCIHDVRLNGELQDLSGGLAGLK
GVLPGCHSCGVCAQGACRQRGEAGVTCECPTGHSGPLCEQMTSQSPCHSSRCVHGVCVPT
GSSYSCSCADGYSGQYCDRRDESAACRGQHCVHGECRATETGEPVCHCQPGYSGPTCEIE
LTCQGEMVRELLKRHMGHKNCTSTSKIPRVECPHACHSGLCCAPTKSRRRKVSFKCSDGS
SFSEEMETTVECGCTKCPL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggtgggtgaagtattgggggacagtggctgtgctgtgcgggctgctgtgctgt
gctgtgaatggatgcccgcataagtgcagttgttcgggctctcatgtggattgtcagggt
caaggcttcaggacggtgcccaggggaatcccgaggaacgccgagaggctggatctggac
aggaataacatcacccggatcaccaaagtggacttcactggcctcaagaacctacgcgtg
ctacatctggagaacaatcaaataagtgtgatcgaaagaggagcgtttcaggaactcaga
cagcttgagagaatccgcctgaaccggaaccggctgcaggtcctgccggagctgctgttc
caatccacacccaagttgggccgcctggacctgagtgagaatcagattcaggctattcca
cgtaaggctttccgagggatcaccaccgtcaagaacctgcaactggacagcaaccacatc
agctgcatcgaagatggagccttccgagccctgcgcgatttggagatactcactctcaac
aacaacaacatcaccctcatcccactgtcaagcttcaaccacatgcccaagctgcggaca
cttcgcctgcactccaacaacctgcactgcgactgccacctgtcctggctctctgattgg
ctgcggcagagaagggggctggcccctttcacacagtgcatggcccccgcccatatgaga
ggtctcaatgtccctgatgttcaaaagagagaatttgtgtgcacaggtcctactcagtcg
gagccaaggtcatgtgctccccaggtgtccgtctgccctgccgactgcacctgcaacaac
aacatcgtagactgccgtagaaaaggcctgacggagattcctgccaacctgcctgaagga
attgtggaaatccgtctggagcagaacatgatcaagagcatcccagcaggagcgttctcc
acatacaagaagctaaagagaatagacctgagcaagaatcagatatccgagattgcagaa
gatgcgtttagtggcctgcgctcgctcacttcactggtcctgtatggaaataaaatcaca
gagatcccaaagggactgtttgatggcctggtctccctccaactgctactcctgaacgcc
aacaagatcaactgtcttcgggtgaacactttcaaagacctgcagaacctcaacctgctg
tctctctacgacaacaagcttcagaccatcagcaaaggcctgttcacccctctgcgtgcc
atcaaaacactacacctcgctcagaatcccttcatgtgtgactgccatctgaagtggctg
gccgactacctgtttgacaatccaatcgagaccagcggagctcgatgcagccacccgcgc
cgcctcgccaacaaacgcatcagccaggtcaagggcaagaagttccgctgcacaggtgcg
gaggactaccgcagtcgtctcagcggcgagtgtttccaggacctggtttgtcccgagcgc
tgtcgttgtgaaggaacggtggtggactgctcgaacctcaaactcaccaagataccccct
cacctgcctgagcacaccactgacctacggctgaacgacaatgaaatccccatcctagag
gctacaggagccttcaagaagctcccaaacctgcgcaagataaacttgagtaataataaa
ctccgggacatccgtgagggggcatttgatggagccggaggtgttttggagctcctgttg
actggaaacaagctgcaaacagtgagcggacggatgttcaagggtttgagcggcctcaaa
acactgatgctgaggagtaatcagatcagctgtgtggataacgccaccttcactggcctg
agctccgtgcgcctgctttccctctatgataaccggatctccactatcgcccctggagct
ttcaacaccctgcattccctctccaccattaacctgctatctaatccctacgtgtgtgac
tgtcacttagcctggctgggactgtggcttaagaagaccagggtggttagtggaaaccca
cgctgccagaaacctgcctttctgaaggagatccctatacaggatgtagccatgcctgat
ttctcctgtgacggtacggaagagaatatctgtctgccatcggcccctcgctgtccggat
tcctgcacatgctcggacacagtggtgcgctgtagtaaccgagggctgcgttccctgcct
aagggcatccctaaagatacaaccgaactatacttggaaggaaacctcctcacgtccgtg
cccaaagagcttcctaatctgaaacaactgactctgctagacctcagtaataacagcatt
agtcttcttgcccctctcaccttcagcaacatgacgcagctcgccacccttatcctgagc
tataatcagattcgctgtgtcccggttcacgcatttgatggcttgcgctctctccgcctg
ctaaccctccacggaaatgacctttcaactattccggagggagccttcagccacttgaca
tctctgtctcatctggctctaggtgcgaaccccctatactgtgactgcgagctgcgctgg
ttgtctcagtgggtgaaggctgggtttaaagagcctggcatcgcccgctgcactggacca
cccgacatggcggaccgactgctgcttaccacccccctcaatcgcttccagtgcaaaggt
ccagcagatttgaatctgatgtccaagtgcgccccctgtctggcggctccctgtcagaac
aacggtacatgtgtgagtgatgtcacaggctcataccactgcacctgcccttttggctac
aagggtcgtaactgtgagattcccattaacgcctgcatcagcctgccgtgtgttaatgga
ggcacgtgtcacctcacacctggactggacggacagtacagctgtgtgtgtccacctggg
tatgagggccagcagtgtgagctgaatcctgatgactgtgaagacaacgactgtgagaat
aactccacctgtgtggacggcatcaacaactacacctgtgtctgcccccctaactacaga
ggtgatctgtgtgaggaggtggttgacccctgtctgcctgggtttgacccctgccaacac
gactccaagtgtgttcccctcagtaagggctacagatgtgaatgtttgccaggatatgtt
ggccagcaatgtgagcaggattacaatgactgtctggagaacaaatgccagcatggggcg
gagtgtgtcgacgccatcaatggatacacgtgtgtgtgcagggaggggttcagcgggttg
ttctgtgagaattctccaccaatggtattgctccaaaagacgagtccatgtgatcaatct
gactgtcaaaacggagcccagtgtttggtcatggagggagagcccatgtgtcgttgtcta
cctggcttcttcggcatcaagtgccataaaatggtcacagtgcacttcctcggcaaagac
acctacgtagagctctccggcaccaagatccgaccacccatgcacatatcccttcaggtg
gccacagataaggacaatggcattcttttgtataaagaggaccatgacccactcgcccta
gagctgtaccagggacacattcgtttgatctatgatgttgccaagtaccccccaaccaca
gtgtacagtgtggagtccgtgaatgatggtcttttccacatggtggaggtgctgatccag
aatcagaccctgagtttggtggtggataaaggggcaccaaaaagcctgggcaaactgccc
cgccctcctgcagtggaccacaacacacatctctatataggcggtgttccctctctgatt
gacacggtaggcctgcgaccgggtccagaccgcccattccagtcctttaacggctgtatt
catgacgtacggctcaacggggaactccaagacctcagcggtggactggcagggctgaag
ggcgtcctgccgggctgtcactcctgtggcgtttgcgctcagggggcctgcagacagaga
ggagaggcaggcgtgacctgcgagtgtcccaccggccacagcggcccactgtgtgaacag
atgacctcccagagcccctgtcacagcagcaggtgtgtgcatggtgtgtgtgtgcctaca
ggctcctcgtacagctgctcatgtgcagatggatactctggccagtactgtgacaggcgg
gatgagtccgccgcatgcagggggcagcactgtgtgcacggagagtgcagagcgacggag
accggagagccggtttgccactgccagcctgggtacagcgggccgacctgtgaaatagag
ctgacgtgccaaggagagatggttcgcgagctgctcaagcgtcacatgggtcataaaaac
tgcacctccaccagtaaaatcccgcgggtggagtgtcctcacgcctgccactcgggcctg
tgctgcgcccccaccaagagccggagacggaaggtcagcttcaaatgctccgacggatcg
tccttttccgaggagatggagaccaccgtggagtgcggctgcacaaagtgcccattgtaa
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integrated database retrieval system
